RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 MTA2O94776 668 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 CSH1P0DML2 217 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 CSH2P0DML3 217 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 GCNT1Q02742 428 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 GABPAQ06546 454 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 MSLNQ13421 630 aaPredicted RBP11.77□□□□□ -0.52
PCSK9-202ENST00000490692 TRIM25Q14258 630 aaKnown RBP11.77□□□□□ -0.52
PCSK9-202ENST00000490692 KYAT3Q6YP21 454 aaKnown RBP11.77□□□□□ -0.52
PCSK9-202ENST00000490692 ZNF410Q86VK4 478 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 CDKL3Q8IVW4 592 aaPredicted RBP11.77□□□□□ -0.52
PCSK9-202ENST00000490692 MOCOSQ96EN8 888 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 RMDN3Q96TC7 470 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 TRIM15Q9C019 465 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 EBF1Q9UH73 591 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 VPS51Q9UID3 782 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 AFG3L2Q9Y4W6 797 aa11.77□□□□□ -0.52
PCSK9-202ENST00000490692 DOT1LQ8TEK3 1739 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 RGSL1A5PLK6 1076 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 EIF3FO00303 357 aaPredicted RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 ANGPT2O15123 496 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 VILLO15195 856 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 VAPBO95292 243 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 MMP10P09238 476 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 GSTT2P0CG29 244 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 GSTT2BP0CG30 244 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 PORP16435 677 aaPredicted RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 MPSTP25325 297 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 MGAT1P26572 445 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 SPRP35270 261 aaPredicted RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 ADAM17P78536 824 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 TAP1Q03518 808 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 PITRM1Q5JRX3 1037 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 MOXD1Q6UVY6 613 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 ZNF781Q8N8C0 355 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.537e-8■■■■■ 54.8
PCSK9-202ENST00000490692 PLEKHO2Q8TD55 490 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 ANKRD36BP1Q96IX9 119 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 SH3GL1Q99961 368 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 MTMR12Q9C0I1 747 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 RAVER2Q9HCJ3 691 aaKnown RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 XPNPEP3Q9NQH7 507 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 CDC14AQ9UNH5 594 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 CYP3A4P08684 503 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 CCNA2P20248 432 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 GPC3P51654 580 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 PLK1P53350 603 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 IL23RQ5VWK5 629 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 DUS1LQ6P1R4 473 aaKnown RBP11.77□□□□□ -0.53
PCSK9-202ENST00000490692 UGT2A3Q6UWM9 527 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 DEFB132Q7Z7B7 95 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 HERC6Q8IVU3 1022 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 C17orf75Q9HAS0 396 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 ABCB10Q9NRK6 738 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 VAV3Q9UKW4 847 aa11.77□□□□□ -0.53
PCSK9-202ENST00000490692 A0A096LPK6 155 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 TRIM13O60858 407 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 CDH2P19022 906 aaPredicted RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 SLC18A1P54219 525 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 OXCT1P55809 520 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 MYL6P60660 151 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 PSME3P61289 254 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 RELAQ04206 551 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 STX5Q13190 355 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 DGCR6Q14129 220 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 ANGEL2Q5VTE6 544 aaKnown RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 UNC5AQ6ZN44 842 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 DHFR2Q86XF0 187 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 SPATA6LQ8N4H0 392 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 KCTD17Q8N5Z5 321 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 JOSD2Q8TAC2 188 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 ACTRT2Q8TDY3 377 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 OSBPL11Q9BXB4 747 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 CAB39LQ9H9S4 337 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 CISHQ9NSE2 258 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 DDX43Q9NXZ2 648 aaKnown RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 STK39Q9UEW8 545 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 ITGB1BP2Q9UKP3 347 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 SHANK3Q9BYB0 1731 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 SH3PXD2BA1X283 911 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 HTR3EA5X5Y0 456 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 PDLIM1O00151 329 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 NFIBO00712 420 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 HMGCRP04035 888 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 CCDC159P0C7I6 412 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 PSMA4P25789 261 aaKnown RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 C15orf59Q2T9L4 293 aaPredicted RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 CDC42EP5Q6NZY7 148 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 MICU2Q8IYU8 434 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 LARGE2Q8N3Y3 721 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 ELMO1Q92556 727 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 IFT43Q96FT9 208 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 NLRP4Q96MN2 994 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 APBA2Q99767 749 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 FRMD8Q9BZ67 464 aaPredicted RBP11.76□□□□□ -0.53
PCSK9-202ENST00000490692 PARVBQ9HBI1 364 aa11.76□□□□□ -0.53
PCSK9-202ENST00000490692 SSU72Q9NP77 194 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms