RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 CHD6Q8TD26 2715 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 CABIN1Q9Y6J0 2220 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 DFNA5O60443 496 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 ACSL4O60488 711 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 GJB3O75712 270 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 GABBR2O75899 941 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 IGLV3-27P01718 113 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 TPM2P07951 284 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 CD59P13987 128 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 HLA-FP30511 346 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 MATKP42679 507 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 RGS7P49802 495 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 AFF3P51826 1226 aaKnown RBP10.75□□□□□ -0.69
TTC28-207ENST00000490475 COPAP53621 1224 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 OXCT1P55809 520 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 TBX4P57082 545 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 SNX16P57768 344 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 UBXN1Q04323 297 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 GRIK2Q13002 908 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 RAPGEF1Q13905 1077 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 TRIP6Q15654 476 aaKnown RBP10.75□□□□□ -0.69
TTC28-207ENST00000490475 PIK3R6Q5UE93 754 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 DCAF12L1Q5VU92 463 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 PMF1Q6P1K2 205 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 DENND1BQ6P3S1 775 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 ANKRD20A12PQ8NF67 263 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 FIBINQ8TAL6 211 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 ZNF606Q8WXB4 792 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 SHC3Q92529 594 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 SKA1Q96BD8 255 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 NAA15Q9BXJ9 866 aaKnown RBP10.75□□□□□ -0.69
TTC28-207ENST00000490475 BTBD1Q9H0C5 482 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 MIR1-1HGQ9H1L0 117 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 TMEM245Q9H330 911 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 GRPEL1Q9HAV7 217 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 SGK2Q9HBY8 427 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 FAM207AQ9NSI2 230 aaPredicted RBP10.75□□□□□ -0.69
TTC28-207ENST00000490475 ABCB8Q9NUT2 735 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 TMEM51Q9NW97 253 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 SLC12A6Q9UHW9 1150 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 NCKAP1Q9Y2A7 1128 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 PCDHGB2Q9Y5G2 931 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 FHOD1Q9Y613 1164 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 KNL1Q8NG31 2342 aa10.75□□□□□ -0.69
TTC28-207ENST00000490475 IGF2RP11717 2491 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 FAM221BA6H8Z2 402 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 LGALS16A8MUM7 142 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 PIK3R2O00459 728 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 CAPN9O14815 690 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 EPHB6O15197 1021 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 FLRT2O43155 660 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 TEX33O43247 280 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 THAP12O43422 761 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 TSPAN3O60637 253 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 APOEP02649 317 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 SLC2A3P11169 496 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 UCHL3P15374 230 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 PRKCHP24723 683 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 NNMTP40261 264 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 SLC12A1Q13621 1099 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 CDH18Q13634 790 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 ARID5BQ14865 1188 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 DRAP1Q14919 205 aaPredicted RBP10.74□□□□□ -0.69
TTC28-207ENST00000490475 SYCP1Q15431 976 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 INAVAQ3KP66 663 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 FKBP15Q5T1M5 1219 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 TMEM215Q68D42 235 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 MBLAC2Q68D91 279 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 ZNF776Q68DI1 518 aaPredicted RBP10.74□□□□□ -0.69
TTC28-207ENST00000490475 USP30Q70CQ3 517 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 GLRX5Q86SX6 157 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 NAXDQ8IW45 347 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 MFN1Q8IWA4 741 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 FAM71AQ8IYT1 594 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 FAM149B1Q96BN6 582 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 NAP1L5Q96NT1 182 aaPredicted RBP10.74□□□□□ -0.69
TTC28-207ENST00000490475 CDC6Q99741 560 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 STK33Q9BYT3 514 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 SLC6A17Q9H1V8 727 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 PLCB1Q9NQ66 1216 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 SIK3Q9Y2K2 1263 aa10.74□□□□□ -0.69
TTC28-207ENST00000490475 SPAARA0A1B0GVQ0 90 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 C1QTNF9BB2RNN3 333 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 MSI1O43347 362 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 TBL1XO60907 577 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 SEMA4FO95754 770 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 SRPRAP08240 638 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 C1QTNF9P0C862 333 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 GNA15P30679 374 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 GPD2P43304 727 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 GRIA4P48058 902 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 RPL34P49207 117 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 POLR2FP61218 127 aaKnown RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 PTK2Q05397 1052 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 TTC39BQ5VTQ0 682 aaPredicted RBP10.73□□□□□ -0.69
TTC28-207ENST00000490475 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 ADIPOR2Q86V24 386 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 SLC47A2Q86VL8 602 aa10.73□□□□□ -0.69
TTC28-207ENST00000490475 ZCCHC9Q8N567 271 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms