RNA–Protein interactions for RNA: ENST00000483508.5

SORT1-205, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 759 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-205ENST00000483508 GRM5P41594 1212 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 SERPINB9P50453 376 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 NDST1P52848 882 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 CDH8P55286 799 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 YWHAGP61981 247 aaKnown RBP eCLIP8.39□□□□□ -1.07
SORT1-205ENST00000483508 CDC42EP1Q00587 391 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 DSC3Q14574 896 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 CRYMQ14894 314 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 EFTUD2Q15029 972 aaKnown RBP eCLIP8.39□□□□□ -1.07
SORT1-205ENST00000483508 TPSAB1Q15661 275 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 AMHR2Q16671 573 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 DCAF4L1Q3SXM0 396 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 CMPK2Q5EBM0 449 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 SLC9A4Q6AI14 798 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 FAM183BPQ6ZVS7 135 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 CYP4V2Q6ZWL3 525 aaPredicted RBP8.39□□□□□ -1.07
SORT1-205ENST00000483508 ARCQ7LC44 396 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 SLC26A11Q86WA9 606 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 KIF2BQ8N4N8 673 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 ZNF276Q8N554 614 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 MAB21L3Q8N8X9 362 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 N4BP2L2Q92802 583 aaPredicted RBP8.39□□□□□ -1.07
SORT1-205ENST00000483508 STAMBPL1Q96FJ0 436 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 TMEM169Q96HH4 297 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 RIPOR3Q96MK2 946 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 ACAP3Q96P50 834 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 CASD1Q96PB1 797 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 PEBP4Q96S96 227 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 WDR83Q9BRX9 315 aaKnown RBP8.39□□□□□ -1.07
SORT1-205ENST00000483508 TSSK1BQ9BXA7 367 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 MRPL9Q9BYD2 267 aaKnown RBP8.39□□□□□ -1.07
SORT1-205ENST00000483508 PLEKHA5Q9HAU0 1116 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 SLCO1B3Q9NPD5 702 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.39□□□□□ -1.07
SORT1-205ENST00000483508 DPP3Q9NY33 737 aa8.39□□□□□ -1.07
SORT1-205ENST00000483508 SAE1Q9UBE0 346 aaPredicted RBP8.39□□□□□ -1.07
SORT1-205ENST00000483508 TCRBV9S1A1TA0A576 114 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 CARNS1A5YM72 827 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 HIDE1A8MVS5 230 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 NT5C1B-RDH14C9J2C7 533 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 E5RJQ4 531 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 COPEO14579 308 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 LIN7AO14910 233 aaPredicted RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 CCDC22O60826 627 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 LUC7L3O95232 432 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 SNRPAP09012 282 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 DARSP14868 501 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 CNTFP26441 200 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TARSP26639 723 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 SDC4P31431 198 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ETV4P43268 484 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 PTPN9P43378 593 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 NR2C2P49116 596 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ARFIP2P53365 341 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 BCAR1P56945 870 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 YWHAZP63104 245 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 CDK16Q00536 496 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 SLC6A3Q01959 620 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 GAD2Q05329 585 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 KRT72Q14CN4 511 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 PRKD1Q15139 912 aaPredicted RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 GOLGA7BQ2TAP0 167 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 SLC10A6Q3KNW5 377 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 PKDCCQ504Y2 493 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TAF1BQ53T94 588 aaPredicted RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 IER5LQ5T953 404 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ATG16L1Q676U5 607 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ARHGAP17Q68EM7 881 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TWF2Q6IBS0 349 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 TMEM184AQ6ZMB5 413 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TMEM110Q86TL2 294 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ZNF410Q86VK4 478 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 UNC93AQ86WB7 457 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 PLD5Q8N7P1 536 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ENDOVQ8N8Q3 282 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 PRSS33Q8NF86 280 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 VN1R2Q8NFZ6 395 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 NSMCE1Q8WV22 266 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 SUSD6Q92537 303 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 SPOCK2Q92563 424 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ATOH1Q92858 354 aaPredicted RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 SLC7A6OSQ96CW6 309 aaPredicted RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 MRRFQ96E11 262 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 NECTIN4Q96NY8 510 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 TSPAN18Q96SJ8 248 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 IQCGQ9H095 443 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 S1PR5Q9H228 398 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ADAMTS10Q9H324 1103 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 MFSD1Q9H3U5 465 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 MINDY3Q9H8M7 445 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 RNPEPL1Q9HAU8 725 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 USP29Q9HBJ7 922 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 PCDH18Q9HCL0 1135 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 XAB2Q9HCS7 855 aaKnown RBP8.38□□□□□ -1.07
SORT1-205ENST00000483508 NPHS2Q9NP85 383 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 ETNK2Q9NVF9 386 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 CNTN3Q9P232 1028 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 HESX1Q9UBX0 185 aa8.38□□□□□ -1.07
SORT1-205ENST00000483508 HMGXB4Q9UGU5 601 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms