RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SLC8A1P32418 973 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ACTN2P35609 894 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PSMC2P35998 433 aaKnown RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 CSKP41240 450 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC11A2P49281 568 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ACADVLP49748 655 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RGS7P49802 495 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 MXI1P50539 228 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RAD23BP54727 409 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 GALCP54803 685 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF445P59923 1031 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 NUCB2P80303 420 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 DAB2P98082 770 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PDE4CQ08493 712 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 BST2Q10589 180 aaKnown RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 BNIP3Q12983 259 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TRIP4Q15650 581 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 CST6Q15828 149 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 HS1BP3Q53T59 392 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SGO2Q562F6 1265 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 DCAF17Q5H9S7 520 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RAB41Q5JT25 222 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TCERG1LQ5VWI1 586 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 BSPRYQ5W0U4 402 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RESP18Q5W5W9 173 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 KRT39Q6A163 491 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3GQ6DHY5 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3CQ6IPX1 549 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 KDM7AQ6ZMT4 941 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 USP30Q70CQ3 517 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SND1Q7KZF4 910 aaKnown RBP eCLIP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 GPR155Q7Z3F1 870 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 FAM217AQ8IXS0 508 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ZC3H3Q8IXZ2 948 aaKnown RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TBC1D3Q8IZP1 549 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TTC39CQ8N584 583 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ANKRD52Q8NB46 1076 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RBBP8NLQ8NC74 664 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 OR2T34Q8NGX1 318 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 EEF2KMTQ96G04 330 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PAGE5Q96GU1 130 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 RSPH9Q9H1X1 276 aaPredicted RBP6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 NEUROG2Q9H2A3 272 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 TMEM8AQ9HCN3 771 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 ABCC13Q9NSE7 274 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 SCML1Q9UN30 329 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 PCDHGA1Q9Y5H4 931 aa6.94□□□□□ -1.3
RTFDC1-206ENST00000477485 KNTC1P50748 2209 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 A0A1B0GVL5 298 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 TTC34A8MYJ7 566 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 K7ELQ4 463 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 TK2O00142 265 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ACTN4O43707 911 aaKnown RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 BNIP3LO60238 219 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 STX10O60499 249 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 C1QL1O75973 258 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 MOCS3O95396 460 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ASLP04424 464 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 C1SP09871 688 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 CDK4P11802 303 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 EPHA8P29322 1005 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 SLC6A4P31645 630 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 CTSOP43234 321 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 TBX4P57082 545 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 CFHR1Q03591 330 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 LRMPQ12912 555 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ADAM9Q13443 819 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 POM121L1PQ3SYA9 428 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 BROXQ5VW32 411 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 NUGGCQ68CJ6 796 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ARHGAP17Q68EM7 881 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 MMS22LQ6ZRQ5 1243 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 TMC6Q7Z403 805 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 UNC45BQ8IWX7 931 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 CFAP52Q8N1V2 620 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ZNF557Q8N988 423 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 HJURPQ8NCD3 748 aaPredicted RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 FBXL13Q8NEE6 735 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 SAP25Q8TEE9 199 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 SEMA4DQ92854 862 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 INTS4Q96HW7 963 aaKnown RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 MYOCQ99972 504 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 DDX50Q9BQ39 737 aaKnown RBP6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 NRSN2Q9GZP1 204 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 PRORYQ9H606 182 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 EBF2Q9HAK2 575 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 RAB20Q9NX57 234 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 CLCA2Q9UQC9 943 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 ERVW-1Q9UQF0 538 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 PTPRQQ9UMZ3 2332 aa6.93□□□□□ -1.3
RTFDC1-206ENST00000477485 EDDM13A0A1B0GTR0 161 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 TEX51A0A1B0GUA7 166 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PYCARD-AS1I3L0S3 204 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 M0QYV0 167 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 TLR4O00206 839 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 WNT9AO14904 365 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 MAPK13O15264 365 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 FFAR2O15552 330 aa6.92□□□□□ -1.3
RTFDC1-206ENST00000477485 PAPSS1O43252 624 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms