RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 ISM2Q6H9L7 571 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 CCDC174Q6PII3 467 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 LRIG3Q6UXM1 1119 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM57BQ71RH2 274 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 MRPL10Q7Z7H8 261 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 RFX6Q8HWS3 928 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 CNGA4Q8IV77 575 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 NKAPQ8N5F7 415 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 DENND1AQ8TEH3 1009 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 C3orf49Q96BT1 292 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TRMT61AQ96FX7 289 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TRAPPC9Q96Q05 1148 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TUBB6Q9BUF5 446 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 ABHD14AQ9BUJ0 271 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 VPS16Q9H269 839 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 G6PC2Q9NQR9 355 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 PAPOLBQ9NRJ5 636 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 KIF17Q9P2E2 1029 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 TRPC5Q9UL62 973 aaPredicted RBP3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 DAPP1Q9UN19 280 aa3.69□□□□□ -1.82
ECHDC1-213ENST00000474240 KAT6AQ92794 2004 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 TMEM247A6NEH6 219 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 HMX3A6NHT5 357 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 PRPF4O43172 522 aaKnown RBP eCLIP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 CCNT1O60563 726 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 CNOT3O75175 753 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 LCKP06239 509 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 MPGP29372 298 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 CCT5P48643 541 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 AARSP49588 968 aaKnown RBP eCLIP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 PAPOLAP51003 745 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 ARL4CP56559 192 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC37A1P57057 533 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 RNASELQ05823 741 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 STIM1Q13586 685 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 TWIST1Q15672 202 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 AWAT1Q58HT5 328 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 ANKRD45Q5TZF3 282 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 LIPMQ5VYY2 423 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 SULT6B1Q6IMI4 303 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 LIN54Q6MZP7 749 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 ZNF474Q6S9Z5 364 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 DHRS13Q6UX07 377 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 ANKRD13BQ86YJ7 626 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 PAQR4Q8N4S7 273 aaPredicted RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 MYCT1Q8N699 235 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 FSIP1Q8NA03 581 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 OR52N4Q8NGI2 321 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 SPPL3Q8TCT6 385 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 DDB2Q92466 427 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 RPL36ALQ969Q0 106 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 SIGLEC11Q96RL6 698 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 PDGFCQ9NRA1 345 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 RASSF1Q9NS23 344 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 SLC12A4Q9UP95 1085 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 B3GNT3Q9Y2A9 372 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 BTBD3Q9Y2F9 522 aa3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 COPG1Q9Y678 874 aaKnown RBP3.68□□□□□ -1.82
ECHDC1-213ENST00000474240 ZMYM2Q9UBW7 1377 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 DPPA5A6NC42 116 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SAC3D1A6NKF1 404 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 MCIDASD6RGH6 385 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 H0Y3Z8 333 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 RRHO14718 337 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 FAM155BO75949 473 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 HLA-DQA2P01906 255 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 FGBP02675 491 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TK1P04183 234 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 CTSAP10619 480 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 HSD3B1P14060 373 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 VEGFAP15692 232 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 HOXA7P31268 230 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 PTGER1P34995 402 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 IDUAP35475 653 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 ADD2P35612 726 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 ARHGAP25P42331 645 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SOX2P48431 317 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 RCAN1P53805 252 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 FOXL2P58012 376 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SRSF1Q07955 248 aaKnown RBP eCLIP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 GAB1Q13480 694 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SEC23BQ15437 767 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SMAD1Q15797 465 aaKnown RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 ZNF626Q68DY1 528 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 RHPN2Q8IUC4 686 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 ANKRD18AQ8IVF6 992 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 ADGRF3Q8IZF5 1079 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 PTGR2Q8N8N7 351 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 USP38Q8NB14 1042 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 SCAMP5Q8TAC9 235 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 GPR78Q96P69 363 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TRMOQ9BU70 441 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 GATA5Q9BWX5 397 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TM2D2Q9BX73 214 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TWSG1Q9GZX9 223 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 TAF1DQ9H5J8 278 aaPredicted RBP3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 PTPRHQ9HD43 1115 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 KLHL13Q9P2N7 655 aa3.67□□□□□ -1.82
ECHDC1-213ENST00000474240 GRHPRQ9UBQ7 328 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms