RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CAPSQ13938 189 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 MYBPC2Q14324 1141 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 FAM187BQ17R55 369 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 Q4G0T1 1027 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 GLRA4Q5JXX5 417 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CENPPQ6IPU0 288 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 SDE2Q6IQ49 451 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 MON1AQ86VX9 555 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 SGMS1Q86VZ5 419 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 ERICH1Q86X53 443 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 NOSTRINQ8IVI9 506 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 DHX40Q8IX18 779 aaKnown RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 RBBP8NLQ8NC74 664 aaPredicted RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CCDC43Q96MW1 224 aaKnown RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 MTMR9Q96QG7 549 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PNKPQ96T60 521 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CCDC94Q9BW85 323 aaPredicted RBP6.3□□□□□ -1.4
NCL-208ENST00000466274 BACH2Q9BYV9 841 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 ZMYND12Q9H0C1 365 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PDZD7Q9H5P4 517 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 ZSWIM4Q9H7M6 989 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 IL21RQ9HBE5 538 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CALCOCO1Q9P1Z2 691 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 CCL26Q9Y258 94 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PMF1-BGLAPU3KQ54 211 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 COL12A1Q99715 3063 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 ABCA12Q86UK0 2595 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 EVPLQ92817 2033 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 NOTCH4Q99466 2003 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 PTPRQQ9UMZ3 2332 aa6.3□□□□□ -1.4
NCL-208ENST00000466274 LRRIQ4A6NIV6 560 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 SH2B2O14492 632 aaPredicted RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 KLK10O43240 276 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 CBFA2T2O43439 604 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 DFNA5O60443 496 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 KAT7O95251 611 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 HNRNPLP14866 589 aaKnown RBP eCLIP6.29□□□□□ -1.4
NCL-208ENST00000466274 L1CAMP32004 1257 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 ARL2P36404 184 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 EIF2DP41214 584 aaKnown RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 GRIA2P42262 883 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 CCT8P50990 548 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 PDE6CP51160 858 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 ANTXR2P58335 489 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 SMARCB1Q12824 385 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 MYO1EQ12965 1108 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 ILKQ13418 452 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.41e-323■■■■■ 53.7
NCL-208ENST00000466274 TCEAL1Q15170 157 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 INF2Q27J81 1249 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 MGAT5BQ3V5L5 792 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 HES3Q5TGS1 186 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 B3GNT9Q6UX72 402 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 LIPIQ6XZB0 460 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 MICU3Q86XE3 530 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 EFCAB13Q8IY85 973 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 MB21D2Q8IYB1 491 aaPredicted RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 FAM26EQ8N5C1 309 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 ATAD1Q8NBU5 361 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 ADCY4Q8NFM4 1077 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 CADM4Q8NFZ8 388 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 KCNE4Q8WWG9 221 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 DNASE2BQ8WZ79 361 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 NAF1Q96HR8 494 aaKnown RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 YTHDC1Q96MU7 727 aaKnown RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 SEPT5Q99719 369 aaPredicted RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 SPATA25Q9BR10 227 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 MCMBPQ9BTE3 642 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 FZD8Q9H461 694 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 TMEM206Q9H813 350 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 UXTQ9UBK9 157 aaPredicted RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 WNT6Q9Y6F9 365 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 NID2Q14112 1375 aa6.29□□□□□ -1.4
NCL-208ENST00000466274 UBR5O95071 2799 aaPredicted RBP6.29□□□□□ -1.4
NCL-208ENST00000466274 COL6A6A6NMZ7 2263 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 TRAV19A0A0A6YYK7 116 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 E2F8A0AVK6 867 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 MTMR11A4FU01 709 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 TBC1D3BA6NDS4 549 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 LAD1O00515 517 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 ACKR2O00590 384 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 LDOC1O95751 146 aaPredicted RBP6.28□□□□□ -1.4
NCL-208ENST00000466274 OR4Q2P0C623 313 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 ZNF16P17020 682 aaPredicted RBP6.28□□□□□ -1.4
NCL-208ENST00000466274 GABRG2P18507 467 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 GLRA2P23416 452 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 ELAVL4P26378 380 aaKnown RBP6.28□□□□□ -1.4
NCL-208ENST00000466274 CD6P30203 668 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 OPRD1P41143 372 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 CORO7P57737 925 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 ERVPABLB-1P60509 514 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 FANCCQ00597 558 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 PPP2R5CQ13362 524 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 PFKFB3Q16875 520 aaPredicted RBP6.28□□□□□ -1.4
NCL-208ENST00000466274 NT5DC1Q5TFE4 455 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 TXNDC8Q6A555 127 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 USP49Q70CQ1 688 aa6.28□□□□□ -1.4
NCL-208ENST00000466274 ZCCHC9Q8N567 271 aaKnown RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms