RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SRSF5Q13243 272 aaKnown RBP26.77■■□□□ 1.88
SMC4-206ENST00000465903 ENPP2Q13822 863 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 EIF4HQ15056 248 aaKnown RBP26.77■■□□□ 1.88
SMC4-206ENST00000465903 CDO1Q16878 200 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 DNAJC24Q6P3W2 148 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 ALYREFQ86V81 257 aaKnown RBP26.77■■□□□ 1.88
SMC4-206ENST00000465903 FAM131BQ86XD5 332 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 ZNF683Q8IZ20 524 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 CHPFQ8IZ52 775 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 SUMF1Q8NBK3 374 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 SIK2Q9H0K1 926 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 CD248Q9HCU0 757 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 CACNA2D2Q9NY47 1150 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 INTS6Q9UL03 887 aaKnown RBP26.77■■□□□ 1.88
SMC4-206ENST00000465903 VANGL2Q9ULK5 521 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 SDK1Q7Z5N4 2213 aa26.77■■□□□ 1.88
SMC4-206ENST00000465903 RIF1Q5UIP0 2472 aaKnown RBP26.76■■□□□ 1.87
SMC4-206ENST00000465903 A0A1W2PQF6 199 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 PRR23AA6NEV1 266 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 AXIN1O15169 862 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 TIMM44O43615 452 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 RTN2O75298 545 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 TDRD12Q587J7 1177 aaKnown RBP26.76■■□□□ 1.87
SMC4-206ENST00000465903 PLEKHA7Q6IQ23 1121 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 SARM1Q6SZW1 724 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 STRADAQ7RTN6 431 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 CIR1Q86X95 450 aaPredicted RBP26.76■■□□□ 1.87
SMC4-206ENST00000465903 GAS2L3Q86XJ1 694 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 AHI1Q8N157 1196 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 ZNF557Q8N988 423 aaPredicted RBP26.76■■□□□ 1.87
SMC4-206ENST00000465903 UCMAQ8WVF2 138 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 ISCUQ9H1K1 167 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 ADAMTS1Q9UHI8 967 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 PAXBP1Q9Y5B6 917 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 STON1Q9Y6Q2 735 aa26.76■■□□□ 1.87
SMC4-206ENST00000465903 ABCA7Q8IZY2 2146 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 GPR179Q6PRD1 2367 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 HOXB2P14652 356 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 HNRNPH3P31942 346 aaKnown RBP26.75■■□□□ 1.87
SMC4-206ENST00000465903 CNR2P34972 360 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 IL12RB1P42701 662 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 ZNF234Q14588 700 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 MBLAC2Q68D91 279 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 KIAA1211LQ6NV74 962 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 CCAR2Q8N163 923 aaKnown RBP26.75■■□□□ 1.87
SMC4-206ENST00000465903 C1orf74Q96LT6 269 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 RPRD1AQ96P16 312 aaPredicted RBP26.75■■□□□ 1.87
SMC4-206ENST00000465903 MCEEQ96PE7 176 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 CIPCQ9C0C6 399 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 EPC1Q9H2F5 836 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 POLMQ9NP87 494 aaPredicted RBP26.75■■□□□ 1.87
SMC4-206ENST00000465903 ARHGAP20Q9P2F6 1191 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 RAD54BQ9Y620 910 aa26.75■■□□□ 1.87
SMC4-206ENST00000465903 OTOGLQ3ZCN5 2332 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 FAM186AA6NE01 2351 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 H0Y626 953 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 ATMINO43313 823 aaPredicted RBP26.74■■□□□ 1.87
SMC4-206ENST00000465903 LMNAP02545 664 aaKnown RBP26.74■■□□□ 1.87
SMC4-206ENST00000465903 HDAC4P56524 1084 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 OGDHQ02218 1023 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 MAMLD1Q13495 774 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 FUT11Q495W5 492 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 RABGAP1LQ5R372 815 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 TTC39BQ5VTQ0 682 aaPredicted RBP26.74■■□□□ 1.87
SMC4-206ENST00000465903 SDE2Q6IQ49 451 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 ANO7Q6IWH7 933 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 MDGA1Q8NFP4 955 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 FAM172AQ8WUF8 416 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 TTC17Q96AE7 1141 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 HAPLN3Q96S86 360 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 KIAA1522Q9P206 1035 aaPredicted RBP26.74■■□□□ 1.87
SMC4-206ENST00000465903 PLXND1Q9Y4D7 1925 aa26.74■■□□□ 1.87
SMC4-206ENST00000465903 NPC1O15118 1278 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 CCP110O43303 1012 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 HOXD11P31277 338 aaPredicted RBP26.73■■□□□ 1.87
SMC4-206ENST00000465903 ZNF143P52747 638 aaPredicted RBP26.73■■□□□ 1.87
SMC4-206ENST00000465903 CDH18Q13634 790 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 TRIM14Q14142 442 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 ARID5BQ14865 1188 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 PTPRNQ16849 979 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 CYB5D2Q8WUJ1 264 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 USP34Q70CQ2 3546 aa26.73■■□□□ 1.87
SMC4-206ENST00000465903 THADAQ6YHU6 1953 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 A0A087X0T9 212 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 A0A1B0GVM2 712 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 TCRBV21S2A2A0A5A6 115 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 TCAF2A6NFQ2 919 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 DRGXA6NNA5 263 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 CNTN5O94779 1100 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 FAM228BP0C875 321 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 ADRA1BP35368 520 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 CXorf57Q6NSI4 855 aaKnown RBP26.72■■□□□ 1.87
SMC4-206ENST00000465903 DRC7Q8IY82 874 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 GAB3Q8WWW8 586 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 ERLEC1Q96DZ1 483 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 DNAJC7Q99615 494 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.72■■□□□ 1.87
SMC4-206ENST00000465903 MAGEB5Q9BZ81 275 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 TPSD1Q9BZJ3 242 aa26.72■■□□□ 1.87
SMC4-206ENST00000465903 PARVAQ9NVD7 372 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms