RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 CACNA2D2Q9NY47 1150 aa16.38■□□□□ 0.21
ERCC3-206ENST00000462306 ZFHX2Q9C0A1 2572 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 PIEZO1Q92508 2521 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 PRR23AA6NEV1 266 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 WASH3PC4AMC7 463 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 AXIN1O15169 862 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 RTN2O75298 545 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 GPD1P21695 349 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 MRE11P49959 708 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 IRAK1P51617 712 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 LMAN2Q12907 356 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 SRSF5Q13243 272 aaKnown RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 MAMLD1Q13495 774 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 CDO1Q16878 200 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 FUT11Q495W5 492 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 RABGAP1LQ5R372 815 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 TTC39BQ5VTQ0 682 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 PLEKHA7Q6IQ23 1121 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 STRADAQ7RTN6 431 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 CIR1Q86X95 450 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 GAS2L3Q86XJ1 694 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 ZNF683Q8IZ20 524 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 AHI1Q8N157 1196 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 UCMAQ8WVF2 138 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 C1orf74Q96LT6 269 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 RPRD1AQ96P16 312 aaPredicted RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 MCEEQ96PE7 176 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 CIPCQ9C0C6 399 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 ISCUQ9H1K1 167 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 ARHGAP20Q9P2F6 1191 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 ADAMTS1Q9UHI8 967 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 INTS6Q9UL03 887 aaKnown RBP16.37■□□□□ 0.21
ERCC3-206ENST00000462306 VANGL2Q9ULK5 521 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 SNX10Q9Y5X0 201 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 STON1Q9Y6Q2 735 aa16.37■□□□□ 0.21
ERCC3-206ENST00000462306 VPS13AQ96RL7 3174 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 A0A1B0GVM2 712 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 TCAF2A6NFQ2 919 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 H0Y626 953 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 NPC1O15118 1278 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ATMINO43313 823 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 LMNAP02545 664 aaKnown RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 HOXB2P14652 356 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 CNR2P34972 360 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 IL12RB1P42701 662 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ZNF143P52747 638 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 HDAC4P56524 1084 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 CDH18Q13634 790 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 TRIM14Q14142 442 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ZNF234Q14588 700 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ARID5BQ14865 1188 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 MBLAC2Q68D91 279 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 SDE2Q6IQ49 451 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ANO7Q6IWH7 933 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 ALYREFQ86V81 257 aaKnown RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 DRC7Q8IY82 874 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 CCAR2Q8N163 923 aaKnown RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 MDGA1Q8NFP4 955 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 FAM172AQ8WUF8 416 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 HAPLN3Q96S86 360 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 DNAJC7Q99615 494 aa16.36■□□□□ 0.21
ERCC3-206ENST00000462306 POLMQ9NP87 494 aaPredicted RBP16.36■□□□□ 0.21
ERCC3-206ENST00000462306 A0A087X0T9 212 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 DRGXA6NNA5 263 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 CCP110O43303 1012 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 FAM228BP0C875 321 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-206ENST00000462306 ADRA1BP35368 520 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 OGDHQ02218 1023 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 PTPRNQ16849 979 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 ACBD5Q5T8D3 534 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-206ENST00000462306 CXorf57Q6NSI4 855 aaKnown RBP16.35■□□□□ 0.21
ERCC3-206ENST00000462306 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 CCDC117Q8IWD4 279 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-206ENST00000462306 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 TTC17Q96AE7 1141 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 CNPY3Q9BT09 278 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 PARVAQ9NVD7 372 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 KIAA1522Q9P206 1035 aaPredicted RBP16.35■□□□□ 0.21
ERCC3-206ENST00000462306 RAD54BQ9Y620 910 aa16.35■□□□□ 0.21
ERCC3-206ENST00000462306 MUC22E2RYF6 1773 aaPredicted RBP16.34■□□□□ 0.21
ERCC3-206ENST00000462306 GPR179Q6PRD1 2367 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 IGLV3-10A0A075B6K4 115 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 ANKRD62A6NC57 917 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 CNTN5O94779 1100 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 ALDH1A2O94788 518 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 DLDP09622 509 aaKnown RBP16.34■□□□□ 0.21
ERCC3-206ENST00000462306 GABRG2P18507 467 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 POLR2EP19388 210 aaKnown RBP16.34■□□□□ 0.21
ERCC3-206ENST00000462306 E2F5Q15329 346 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 ALFQ53S48 1182 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 PITRM1Q5JRX3 1037 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 DCUN1D2Q6PH85 259 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 CYB5D2Q8WUJ1 264 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 HMGB4Q8WW32 186 aa16.34■□□□□ 0.21
ERCC3-206ENST00000462306 GAB3Q8WWW8 586 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms