RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 IL37Q9NZH6 218 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 EHD2Q9NZN4 543 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 BCCIPQ9P287 314 aaKnown RBP eCLIP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CGNQ9P2M7 1197 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MBD1Q9UIS9 605 aaPredicted RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 MMP17Q9ULZ9 603 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PPT2Q9UMR5 302 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 SH3BP1Q9Y3L3 701 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 CACNA1AO00555 2505 aa4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 GOLGA4Q13439 2230 aaKnown RBP4.95□□□□□ -1.62
GTF3C3-208ENST00000455546 PLXND1Q9Y4D7 1925 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 A0A1W2PQH9 124 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TCRBV21S2A2A0A5A6 115 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 E2F8A0AVK6 867 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 LNP1A1A4G5 178 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PRAMEF27A3QJZ7 478 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM221AA4D161 298 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 WASH3PC4AMC7 463 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PRRT4C9JH25 899 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 HHLA1C9JL84 531 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 NEDD8-MDP1E9PL57 170 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PDXKO00764 312 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CDX4O14627 284 aaPredicted RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 GNB5O14775 395 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CYP26A1O43174 497 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 WIPF1O43516 503 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TLR5O60602 858 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CILPO75339 1184 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TULP3O75386 442 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 AKAP3O75969 853 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 KCNK5O95279 499 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TOP3BO95985 862 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ASS1P00966 412 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 HMBSP08397 361 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ZDHHC11BP0C7U3 371 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PFKLP17858 780 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CD58P19256 250 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SPINK2P20155 84 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ACO1P21399 889 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ATP5C1P36542 298 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 GRIA2P42262 883 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PIK3CAP42336 1068 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PTGER3P43115 390 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SYKP43405 635 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TNFRSF4P43489 277 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 LIMK1P53667 647 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 AP3M2P53677 418 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 GAD2Q05329 585 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ADAM9Q13443 819 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ELF2Q15723 593 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 UAP1L1Q3KQV9 507 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ZACNQ401N2 412 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 EOGTQ5NDL2 527 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SNX30Q5VWJ9 437 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 BTBD8Q5XKL5 378 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 FBXW10Q5XX13 1052 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PMS2CLQ68D20 193 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ATL3Q6DD88 541 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 LRFN4Q6PJG9 635 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CLEC20AQ6ZU45 233 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TOGARAM2Q6ZUX3 1019 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 RASSF3Q86WH2 238 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SMYD4Q8IYR2 804 aaPredicted RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ZSCAN1Q8NBB4 408 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 NDRG1Q92597 394 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SEMA4DQ92854 862 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ERCC4Q92889 916 aaPredicted RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 P2RY11Q96G91 374 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PLPPR2Q96GM1 343 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CNOT6LQ96LI5 555 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SPATA32Q96LK8 384 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CEP295NLQ96MC4 621 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 HEXIM2Q96MH2 286 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 EDEM2Q9BV94 578 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 SLC6A17Q9H1V8 727 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 GOLPH3LQ9H4A5 285 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 NMUR1Q9HB89 426 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 DMAP1Q9NPF5 467 aaPredicted RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CD93Q9NPY3 652 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TLR8Q9NR97 1041 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 VPS45Q9NRW7 570 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 RAD18Q9NS91 495 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 TBC1D14Q9P2M4 693 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 DEC1Q9P2X7 70 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 MKL2Q9ULH7 1088 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 AP4E1Q9UPM8 1137 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 HPSEQ9Y251 543 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 FRMD4BQ9Y2L6 1034 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 PCDHGA5Q9Y5G8 931 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CORINQ9Y5Q5 1042 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ATP8B3O60423 1300 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ATXN2Q99700 1313 aaKnown RBP4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 CKAP5Q14008 2032 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 ACACBO00763 2458 aa4.94□□□□□ -1.62
GTF3C3-208ENST00000455546 KNTC1P50748 2209 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 FAM92AA1XBS5 289 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 IKBKBO14920 756 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 CALUO43852 315 aaPredicted RBP4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 ALDH1A2O94788 518 aa4.93□□□□□ -1.62
GTF3C3-208ENST00000455546 RHOBTB3O94955 611 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms