RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 OGDHQ02218 1023 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 NRG1Q02297 640 aaPredicted RBP14.64□□□□□ -0.07
HDAC4-205ENST00000454542 SCAPQ12770 1279 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 LMAN2Q12907 356 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 MAMLD1Q13495 774 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 FUT11Q495W5 492 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 RABGAP1LQ5R372 815 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 SH3PXD2AQ5TCZ1 1133 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 MANEALQ5VSG8 457 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 CXorf57Q6NSI4 855 aaKnown RBP14.64□□□□□ -0.07
HDAC4-205ENST00000454542 SND1Q7KZF4 910 aaKnown RBP eCLIP14.64□□□□□ -0.07
HDAC4-205ENST00000454542 CHST9Q7L1S5 443 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 C14orf80Q86SX3 495 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 FAM131BQ86XD5 332 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 CCDC33Q8N5R6 958 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 FNIP1Q8TF40 1166 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 RNF34Q969K3 372 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 IGSF8Q969P0 613 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 NTAN1Q96AB6 310 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 TRIM11Q96F44 468 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 C1orf74Q96LT6 269 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 HAPLN3Q96S86 360 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 ACOX2Q99424 681 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 EPC1Q9H2F5 836 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 SEMA4AQ9H3S1 761 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 WDCPQ9H6R7 721 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 ABHD10Q9NUJ1 306 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 ELOVL2Q9NXB9 296 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 INTS6Q9UL03 887 aaKnown RBP14.64□□□□□ -0.07
HDAC4-205ENST00000454542 NEU3Q9UQ49 428 aa14.64□□□□□ -0.07
HDAC4-205ENST00000454542 A0A087X0T9 212 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 A0A1W2PQF6 199 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 TMCO5BA8MYB1 307 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 FTLP02792 175 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-205ENST00000454542 FAM228BP0C875 321 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 MYBL1P10243 752 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 C7P10643 843 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 IL12RB1P42701 662 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 FNTBP49356 437 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 ATP11AP98196 1134 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 ZNF252P-AS1Q0IIN9 211 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-205ENST00000454542 CDH18Q13634 790 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 CDO1Q16878 200 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 ASTE1Q2TB18 679 aaPredicted RBP14.63□□□□□ -0.07
HDAC4-205ENST00000454542 FSCBQ5H9T9 825 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 DNAAF5Q86Y56 855 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 CCAR2Q8N163 923 aaKnown RBP14.63□□□□□ -0.07
HDAC4-205ENST00000454542 CFAP52Q8N1V2 620 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 TSTD1Q8NFU3 115 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 FAM172AQ8WUF8 416 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 TMPRSS4Q9NRS4 437 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 PARVAQ9NVD7 372 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 STIM2Q9P246 746 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 ZNF212Q9UDV6 495 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 ADAMTS1Q9UHI8 967 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 VANGL2Q9ULK5 521 aa14.63□□□□□ -0.07
HDAC4-205ENST00000454542 CHD5Q8TDI0 1954 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 SSU72P8A0A1W2PR75 194 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 PRR23AA6NEV1 266 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 DRGXA6NNA5 263 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 TIMM44O43615 452 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 HOXB2P14652 356 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 CNR2P34972 360 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 ZNF234Q14588 700 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 E2F5Q15329 346 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 PTPRNQ16849 979 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 MBLAC2Q68D91 279 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 VPS36Q86VN1 386 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 CIR1Q86X95 450 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-205ENST00000454542 SUMF1Q8NBK3 374 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 MDGA1Q8NFP4 955 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 OR8K1Q8NGG5 319 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 UCMAQ8WVF2 138 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 TTC17Q96AE7 1141 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 ZNF653Q96CK0 615 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 MYO19Q96H55 970 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 MRFAP1L1Q96HT8 127 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 RPRD1AQ96P16 312 aaPredicted RBP14.62□□□□□ -0.07
HDAC4-205ENST00000454542 CNPY3Q9BT09 278 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 CACNA2D2Q9NY47 1150 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 CNOT8Q9UFF9 292 aaKnown RBP14.62□□□□□ -0.07
HDAC4-205ENST00000454542 SCINQ9Y6U3 715 aa14.62□□□□□ -0.07
HDAC4-205ENST00000454542 TMEM191CA6NGB0 347 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 AXIN1O15169 862 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CLDN11O75508 207 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 PLK1P53350 603 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CDH4P55283 916 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 SLC12A1Q13621 1099 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 PLEKHG6Q3KR16 790 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 PITRM1Q5JRX3 1037 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CNGA4Q8IV77 575 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CHPFQ8IZ52 775 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CARNMT1Q8N4J0 409 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 ALG14Q96F25 216 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 TRIM5Q9C035 493 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 OSBPL2Q9H1P3 480 aa14.61□□□□□ -0.07
HDAC4-205ENST00000454542 TMEM245Q9H330 911 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms