RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 LRRC31Q6UY01 552 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 MMS22LQ6ZRQ5 1243 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 PHLDB2Q86SQ0 1253 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 CIR1Q86X95 450 aaPredicted RBP17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 XYLT1Q86Y38 959 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 FRMD1Q8N878 549 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 FIBINQ8TAL6 211 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 WFDC5Q8TCV5 224 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 BPIFA3Q9BQP9 254 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 VANGL2Q9ULK5 521 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 SIK3Q9Y2K2 1263 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 PLXND1Q9Y4D7 1925 aa17.33■□□□□ 0.36
TSPAN9-204ENST00000444315 BCLAF3A2AJT9 711 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 ANKRD62A6NC57 917 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 EPHB6O15197 1021 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 RNASEH1O60930 286 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 F9P00740 461 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 IGLV3-25P01717 112 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 CHRM1P11229 460 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 CDH5P33151 784 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 GGCXP38435 758 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 CSKP41240 450 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 DPP6P42658 865 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 ATXN3P54252 364 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 OXCT1P55809 520 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 CDO1Q16878 200 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 PITRM1Q5JRX3 1037 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 SYCP2LQ5T4T6 812 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 TMEM215Q68D42 235 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 RNF43Q68DV7 783 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 TCEAL6Q6IPX3 200 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 FAM124AQ86V42 546 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 TMPRSS6Q8IU80 811 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 ZNF397Q8NF99 534 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 TCEAL3Q969E4 200 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 PPP1R9BQ96SB3 815 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 EDEM2Q9BV94 578 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 NUSAP1Q9BXS6 441 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 TKTL2Q9H0I9 626 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 SUN2Q9UH99 717 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 MBD1Q9UIS9 605 aaPredicted RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 NOCTQ9UK39 431 aaKnown RBP17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 SPTBN4Q9H254 2564 aa17.32■□□□□ 0.36
TSPAN9-204ENST00000444315 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 A0A1B0GVM2 712 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 TCAF2A6NFQ2 919 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 PAGE1O75459 146 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 DNTTP04053 509 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 PDGFRAP16234 1089 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 FERP16591 822 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 JAM2P57087 298 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 CENPCQ03188 943 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 ZNF177Q13360 481 aaPredicted RBP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 NCAPHQ15003 741 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 TTC31Q49AM3 519 aaPredicted RBP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 BRMS1LQ5PSV4 323 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 ADIPOR2Q86V24 386 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 CCAR2Q8N163 923 aaKnown RBP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 OR2T3Q8NH03 318 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 SLC30A5Q8TAD4 765 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 DDX1Q92499 740 aaKnown RBP17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 SNX19Q92543 992 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 HSPA12BQ96MM6 686 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 ERGIC2Q96RQ1 377 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 TBCBQ99426 244 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 RTKNQ9BST9 563 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 SELENOOQ9BVL4 669 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 MUC3BQ9H195 1237 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 SLC25A13Q9UJS0 675 aa17.31■□□□□ 0.36
TSPAN9-204ENST00000444315 IGHV1OR15-9A0A0B4J2B8 117 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 GDF9O60383 454 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 CALB1P05937 261 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 CD6P30203 668 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 OXTRP30559 389 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 SDC4P31431 198 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 SCNN1AP37088 669 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 PTGER3P43115 390 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 GABRB2P47870 512 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 ATP11AP98196 1134 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 FMO1Q01740 532 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 AUHQ13825 339 aaKnown RBP17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 SLC25A52Q3SY17 297 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 DHX40Q8IX18 779 aaKnown RBP17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 MYEOVQ96EZ4 313 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 CFAP57Q96MR6 1250 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 FBRSQ9HAH7 460 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 TMEM51Q9NW97 253 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 ADAM22Q9P0K1 906 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 CKAP5Q14008 2032 aa17.3■□□□□ 0.36
TSPAN9-204ENST00000444315 RHOCP08134 193 aa17.29■□□□□ 0.36
TSPAN9-204ENST00000444315 TNFAIP3P21580 790 aa17.29■□□□□ 0.36
TSPAN9-204ENST00000444315 TGM1P22735 817 aa17.29■□□□□ 0.36
TSPAN9-204ENST00000444315 ITPKAP23677 461 aa17.29■□□□□ 0.36
TSPAN9-204ENST00000444315 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms