RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 IL1BP01584 269 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 NUMBP49757 651 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 FIGNQ5HY92 759 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 FBXL16Q8N461 479 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 TSC22D3Q99576 134 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 NFKBIL1Q9UBC1 381 aaPredicted RBP11.46□□□□□ -0.57
FN1-211ENST00000443816 CHORDC1Q9UHD1 332 aaPredicted RBP11.46□□□□□ -0.57
FN1-211ENST00000443816 PDE4DIPQ5VU43 2346 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.57
FN1-211ENST00000443816 CDH8P55286 799 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 GUCY1A3Q02108 690 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 MTM1Q13496 603 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 NCF4Q15080 339 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 NR6A1Q15406 480 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 TTI2Q6NXR4 508 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 FBXO36Q8NEA4 188 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 PIK3R5Q8WYR1 880 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 FAM136AQ96C01 138 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 SEMA6BQ9H3T3 888 aa11.46□□□□□ -0.57
FN1-211ENST00000443816 A0A087X0T9 212 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 NUDT14O95848 222 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 FYNP06241 537 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 FAM228BP0C875 321 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 RARGP13631 454 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 CXCR2P25025 360 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 MAGEA9P43362 315 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 MMRN1Q13201 1228 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 FAM110CQ1W6H9 321 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 CCDC33Q8N5R6 958 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 CPNE1Q99829 537 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 RAD21L1Q9H4I0 556 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 EFCAB1Q9HAE3 211 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 PCDH9Q9HC56 1237 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 INTS7Q9NVH2 962 aaKnown RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 ST3GAL5Q9UNP4 418 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 ZNF232Q9UNY5 417 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 MAPRE3Q9UPY8 281 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 ZDHHC9Q9Y397 364 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 CCNT2O60583 730 aaKnown RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 PLEKP08567 350 aaPredicted RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 TCN1P20061 433 aaPredicted RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 TLX1P31314 330 aaPredicted RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 MRPS15P82914 257 aaKnown RBP11.46□□□□□ -0.58
FN1-211ENST00000443816 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 ZNHIT2Q9UHR6 403 aa11.46□□□□□ -0.58
FN1-211ENST00000443816 SGTAO43765 313 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 PEX5P50542 639 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 PLPP4Q5VZY2 271 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 KCNMB4Q86W47 210 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 GLTPD2A6NH11 291 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 TBL1XO60907 577 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 CCDC142Q17RM4 750 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 SCARA3Q6AZY7 606 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 VSIG10LQ86VR7 867 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 MSL3Q8N5Y2 521 aaKnown RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 OR8D1Q8WZ84 308 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 NSL1Q96IY1 281 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 ADI1Q9BV57 179 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 THRAP10827 490 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 ZNF24P17028 368 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 LAG3P18627 525 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 TYMPP19971 482 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 NUDT2P50583 147 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 MCOLN2Q8IZK6 566 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 HJURPQ8NCD3 748 aaPredicted RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 ACTRT1Q8TDG2 376 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 APOL2Q9BQE5 337 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 BRD9Q9H8M2 597 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 CYP4F12Q9HCS2 524 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.45□□□□□ -0.58
FN1-211ENST00000443816 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 A0A087X1B8 175 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 ERI2A8K979 691 aaKnown RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 ACSL4O60488 711 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 VPS4BO75351 444 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 IFNGR2P38484 337 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 TOB1P50616 345 aaPredicted RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 MGAT5Q09328 741 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 GRM3Q14832 879 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 WSCD1Q658N2 575 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 CCNI2Q6ZMN8 369 aaPredicted RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 DENND1CQ8IV53 801 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 EMC1Q8N766 993 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 TATDN2Q93075 761 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 CELF6Q96J87 481 aaKnown RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 ASB2Q96Q27 587 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 ZYG11BQ9C0D3 744 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 TNFSF13BQ9Y275 285 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 NUP98P52948 1817 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 SMIM35A0A1B0GVV1 85 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 GCATO75600 419 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 GPR1P46091 355 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 RPS7P62081 194 aaKnown RBP11.45□□□□□ -0.58
FN1-211ENST00000443816 ALFQ53S48 1182 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 LONP2Q86WA8 852 aa11.45□□□□□ -0.58
FN1-211ENST00000443816 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms