RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 HDAC3O15379 428 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 MED7O43513 233 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ATE1O95260 518 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 KRT6AP02538 564 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 KRT6BP04259 564 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PTPN1P18031 435 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 SPIRE1Q08AE8 756 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TRAP1Q12931 704 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 IKBKEQ14164 716 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 DGKDQ16760 1214 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 CCDC142Q17RM4 750 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 GLRA4Q5JXX5 417 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 IFNLR1Q8IU57 520 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 EXOC8Q8IYI6 725 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TRIM39Q9HCM9 518 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 FARP1Q9Y4F1 1045 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 RNASEH2AO75792 299 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 ENO2P09104 434 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 KDELR1P24390 212 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 KRT6CP48668 564 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TMBIM6P55061 237 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 MRPS15P82914 257 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 KCNJ11Q14654 390 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PIGGQ5H8A4 983 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SCYL2Q6P3W7 929 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 INO80BQ9C086 356 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 HESX1Q9UBX0 185 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 VPS28Q9UK41 221 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PRELID1Q9Y255 219 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 RAD51BO15315 384 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TBC1D4O60343 1298 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 APOA4P06727 396 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 UNGP13051 313 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 PPM1JQ5JR12 505 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 DHRS4L2Q6PKH6 230 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ZNF276Q8N554 614 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 S100ZQ8WXG8 99 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 NXF1Q9UBU9 619 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 SPEF1Q9Y4P9 236 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ORC6Q9Y5N6 252 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 HADHAP40939 763 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 CDKL3Q8IVW4 592 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 ZC3H7AQ8IWR0 971 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 LRTOMTQ8WZ04 291 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SPATA17Q96L03 361 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 CPNE1Q99829 537 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 RBM38Q9H0Z9 239 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 SPATA31A6Q5VVP1 1343 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SLCO1B7G3V0H7 640 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TRIM38O00635 465 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 DGUOKQ16854 277 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 LDLRAP1Q5SW96 308 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 STXBP5Q5T5C0 1151 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 DNAJC14Q6Y2X3 702 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 C11orf74Q86VG3 221 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PEX5LQ8IYB4 626 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 GSTA4O15217 222 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 QARSP47897 775 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 ANKRD26P1Q6NSI1 321 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ARPC5LQ9BPX5 153 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SNX5Q9Y5X3 404 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 STX16-NPEPL1H3BU86 382 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 FASP25445 335 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 STX1BP61266 288 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 IFRD2Q12894 506 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 HERC6Q8IVU3 1022 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 CCDC60Q8IWA6 550 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 GIMAP4Q9NUV9 329 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ADAM28Q9UKQ2 775 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SOBPA7XYQ1 873 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TCF4P15884 667 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 MMP8P22894 467 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 TUBA3CQ13748 450 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 MAPRE1Q15691 268 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 AARS2Q5JTZ9 985 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 KCNT1Q5JUK3 1230 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ZBED2Q9BTP6 218 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 BFARQ9NZS9 450 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PAPSS1O43252 624 aaPredicted RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 TRUB2O95900 331 aaKnown RBP5.13□□□□□ -1.59
HERC1-201ENST00000443617 ERVK-10P10266 1014 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 ZBTB46Q86UZ6 589 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 LILRA2Q8N149 483 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PACRGLQ8N7B6 248 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 PCYOX1LQ8NBM8 494 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SLC35B2Q8TB61 432 aa5.13□□□□□ -1.59
HERC1-201ENST00000443617 SNX2O60749 519 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 RFPL1O75677 317 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NR4A1P22736 598 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 ETFBP38117 255 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CAPGP40121 348 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 NPTX2P47972 431 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 SNX16P57768 344 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DCAF6Q58WW2 860 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 CHSY3Q70JA7 882 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 GPD1LQ8N335 351 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 TBC1D15Q8TC07 691 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 DGKBQ9Y6T7 804 aa5.12□□□□□ -1.59
HERC1-201ENST00000443617 HOXD11P31277 338 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms