RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 BMPR2Q13873 1038 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CNN3Q15417 329 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 EZH2Q15910 746 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 KHDC1Q4VXA5 237 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF362Q5T0B9 420 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF618Q5T7W0 954 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 LRCH2Q5VUJ6 765 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 FCRLBQ6BAA4 426 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRR5LQ6MZQ0 368 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 DARS2Q6PI48 645 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TMTC3Q6ZXV5 915 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 DZIP1Q86YF9 867 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 SRRM1Q8IYB3 904 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 OR2C3Q8N628 320 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CNBD1Q8NA66 436 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CNNM3Q8NE01 707 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 DEPTORQ8TB45 409 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 POC1BQ8TC44 478 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 ANKS1AQ92625 1134 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 KAT5Q92993 513 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 FKBP10Q96AY3 582 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC34Q96HJ3 373 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 RBM17Q96I25 401 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC138Q96M89 665 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TBCBQ99426 244 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 CGRRF1Q99675 332 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 APOL5Q9BWW9 433 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 SEMA4CQ9C0C4 833 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 KAT14Q9H8E8 782 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 GPR35Q9HC97 309 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TRMT13Q9NUP7 481 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 MCM9Q9NXL9 1143 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 NRBP1Q9UHY1 535 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 FBXO2Q9UK22 296 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 TRPC5Q9UL62 973 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PYCARDQ9ULZ3 195 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 PADI4Q9UM07 663 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 SRPRBQ9Y5M8 271 aaKnown RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 MORC2Q9Y6X9 1032 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 MYH3P11055 1940 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 COL1A1P02452 1464 aaPredicted RBP3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 LAMB2P55268 1798 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 BCORQ6W2J9 1755 aa3.79□□□□□ -1.8
HMGB3P11-201ENST00000440127 C4AP0C0L4 1744 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 C4BP0C0L5 1744 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 COL5A3P25940 1745 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 COL4A1P02462 1669 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 MROH7-TTC4A0A0A0MT08 1334 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 UQCRHLA0A096LP55 91 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CAPN8A6NHC0 703 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 TSPY2A6NKD2 308 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 F5H423 210 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 INO80B-WBP1J3KQ70 363 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SMIM22K7EJ46 135 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 F2RL2O00254 374 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 DYNC1I1O14576 645 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 MGST3O14880 152 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 RBMXL2O75526 392 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SMC2O95347 1197 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PLEKHA8P1O95397 391 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 MATN4O95460 622 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRKCGP05129 697 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 UQCRHP07919 91 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SBK3P0C264 359 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CYP2D6P10635 497 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 GATA3P23771 443 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PIK3CBP42338 1070 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PRIM2P49643 509 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 GNAQP50148 359 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CASP5P51878 434 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 GSDMDP57764 484 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 NLRP5P59047 1200 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PSMC1P62191 440 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 GPSM2P81274 684 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 TFAP4Q01664 338 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 PNOCQ13519 176 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 KIF22Q14807 665 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 DPCR1Q3MIW9 517 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CRY2Q49AN0 593 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 FLYWCH1Q4VC44 716 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CCDC157Q569K6 752 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 C12orf60Q5U649 245 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 RNF220Q5VTB9 566 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 ISM2Q6H9L7 571 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 LAYNQ6UX15 382 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF788Q6ZQV5 615 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF551Q7Z340 670 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 LRRC8AQ8IWT6 810 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 ZNF444Q8N0Y2 327 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CPXCR1Q8N123 301 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 C17orf53Q8N3J3 647 aaPredicted RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SRBD1Q8N5C6 995 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 BRIX1Q8TDN6 353 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 LRTOMTQ8WZ04 291 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 RIPOR3Q96MK2 946 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 NAP1L4Q99733 375 aaKnown RBP3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 LZTS2Q9BRK4 669 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 CRB3Q9BUF7 120 aa3.78□□□□□ -1.8
HMGB3P11-201ENST00000440127 SELENOOQ9BVL4 669 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms