RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ALDH18A1P54886 795 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 SNRPD1P62314 119 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 MBTD1Q05BQ5 628 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 FAM187BQ17R55 369 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 PLEKHA7Q6IQ23 1121 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 IFNL1Q8IU54 200 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 TRIM48Q8IWZ4 208 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 ICA1LQ8NDH6 482 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 UPF1Q92900 1129 aaKnown RBP eCLIP12.24□□□□□ -0.453e-7■■■■■ 28
PTPRF-205ENST00000414879 CIPCQ9C0C6 399 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 RMND5AQ9H871 391 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 MAPRE3Q9UPY8 281 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 RUVBL2Q9Y230 463 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 A0A087X1B8 175 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 F8VP50 259 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 OR56A5P0C7T3 313 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 POLR2EP19388 210 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 CYP2A7P20853 494 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 MSLNQ13421 630 aaPredicted RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 SYCP2LQ5T4T6 812 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 USP45Q70EL2 814 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 LRRC8DQ7L1W4 858 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 ACBD6Q9BR61 282 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 NCKAP1Q9Y2A7 1128 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 DYRK1BQ9Y463 629 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 HADHBP55084 474 aaKnown RBP12.24□□□□□ -0.45
PTPRF-205ENST00000414879 SULT2A1Q06520 285 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 SZRD1Q7Z422 152 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 KCNMB4Q86W47 210 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 CSGALNACT1Q8TDX6 532 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 KAT5Q92993 513 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 FAM111AQ96PZ2 611 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 ING2Q9H160 280 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 NRDE2Q9H7Z3 1164 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 CTNNAL1Q9UBT7 734 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 TUBGCP4Q9UGJ1 667 aa12.24□□□□□ -0.45
PTPRF-205ENST00000414879 B4GALT5O43286 388 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 DDHD2O94830 711 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SMPD1P17405 629 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ELK3P41970 407 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 GLUD2P49448 558 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SERPINH1P50454 418 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 MAP3K10Q02779 954 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PRKAA1Q13131 559 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SPDYE7PQ495Y7 208 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 IRF2BP1Q8IU81 584 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 TRIML2Q8N7C3 387 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 OR9Q1Q8NGQ5 310 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ACMSDQ8TDX5 336 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 AENQ8WTP8 325 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 C7orf43Q8WVR3 580 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ANKZF1Q9H8Y5 726 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 FAM32AQ9Y421 112 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 TMEM191CA6NGB0 347 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 LIASO43766 372 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ALDH1A2O94788 518 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 EEF1B2P24534 225 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 CAMK2GQ13555 558 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ADCK2Q7Z695 626 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ALLCQ8N6M5 410 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 RUBCNLQ9H714 662 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ETNK2Q9NVF9 386 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SUPT7LO94864 414 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ACADMP11310 421 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PECAM1P16284 738 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SCNN1AP37088 669 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 RPL21P46778 160 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 TP53BP2Q13625 1128 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 KCNA10Q16322 511 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SEL1L3Q68CR1 1132 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 MAGEC3Q8TD91 643 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SNRNP25Q9BV90 132 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 APOL5Q9BWW9 433 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 AHSPQ9NZD4 102 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 FAM50BQ9Y247 325 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 AP3M1Q9Y2T2 418 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 C10orf71Q711Q0 1435 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 IFRD1O00458 451 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 RAD51BO15315 384 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PTPN7P35236 360 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SKOR1P84550 965 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 GJC2Q5T442 439 aaPredicted RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 MYCBPAPQ8TBZ2 947 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ATXN2LQ8WWM7 1075 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 APOPT1Q96IL0 206 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 ALG13Q9NP73 1137 aaKnown RBP12.23□□□□□ -0.45
PTPRF-205ENST00000414879 VPS45Q9NRW7 570 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 SELENONQ9NZV5 590 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 KIF17Q9P2E2 1029 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PADI3Q9ULW8 664 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 PHTF1Q9UMS5 762 aa12.23□□□□□ -0.45
PTPRF-205ENST00000414879 C22orf31O95567 290 aa12.22□□□□□ -0.45
PTPRF-205ENST00000414879 KRT6AP02538 564 aa12.22□□□□□ -0.45
PTPRF-205ENST00000414879 KRT6BP04259 564 aa12.22□□□□□ -0.45
PTPRF-205ENST00000414879 MSH3P20585 1137 aa12.22□□□□□ -0.45
PTPRF-205ENST00000414879 PTPN9P43378 593 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms