RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 SEPT8Q92599 483 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RAB7BQ96AH8 199 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PTERQ96BW5 349 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 VCPIP1Q96JH7 1222 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PDLIM2Q96JY6 352 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CAMK1GQ96NX5 476 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RPRD1AQ96P16 312 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 FAM111AQ96PZ2 611 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 NR1H4Q96RI1 486 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 DMRTA2Q96SC8 542 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PKP4Q99569 1192 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PRPF18Q99633 342 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RAD9AQ99638 391 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CDC6Q99741 560 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CIB1Q99828 191 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 C19orf43Q9BQ61 176 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CCDC77Q9BR77 488 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PYM1Q9BRP8 204 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SORBS1Q9BX66 1292 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PARD6BQ9BYG5 372 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MRPL37Q9BZE1 423 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 EPN3Q9H201 632 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CENPHQ9H3R5 247 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CNTD2Q9H8S5 307 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 NTN4Q9HB63 628 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SIRT3Q9NTG7 399 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 INTS13Q9NVM9 706 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF446Q9NWS9 450 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GFOD1Q9NXC2 390 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PAQR5Q9NXK6 330 aaPredicted RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MIS18AQ9NYP9 233 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TAS2R7Q9NYW3 318 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 WWOXQ9NZC7 414 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MORF4L1Q9UBU8 362 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 IPO11Q9UI26 975 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MAD2L2Q9UI95 211 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 GPR160Q9UJ42 338 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TCFL5Q9UL49 500 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 MYO6Q9UM54 1294 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 SLC8A2Q9UPR5 921 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 ERVK-19Q9WJR5 959 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 RUVBL1Q9Y265 456 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 NAALAD2Q9Y3Q0 740 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TELO2Q9Y4R8 837 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGB2Q9Y5G2 931 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA9Q9Y5G4 932 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA8Q9Y5G5 932 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA7Q9Y5G6 932 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA6Q9Y5G7 932 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 PCDHGA3Q9Y5H0 932 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TNPO3Q9Y5L0 923 aaKnown RBP3.77□□□□□ -1.81
SF3B1-203ENST00000414174 CYP46A1Q9Y6A2 500 aa3.77□□□□□ -1.81
SF3B1-203ENST00000414174 TTC21AQ8NDW8 1320 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 BAZ1BQ9UIG0 1483 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SH3D21A4FU49 640 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 HTR3EA5X5Y0 456 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AGAP14A8MT82 685 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 A8MXE2 369 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KIF28PB7ZC32 967 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 F8W8V4 182 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 GTPBP1O00178 669 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TAF4O00268 1085 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SH2B2O14492 632 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 N4BP3O15049 544 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CD3EAPO15446 510 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 KRT86O43790 486 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 GPRIN2O60269 458 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CCNT1O60563 726 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 GJB3O75712 270 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TSPAN9O75954 239 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 RNF8O76064 485 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 BEST1O76090 585 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SEC31AO94979 1220 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 GCNT3O95395 438 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 OTCP00480 354 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AFPP02771 609 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ASLP04424 464 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 THP07101 528 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PABPC4LP0CB38 370 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CSH1P0DML2 217 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CSH2P0DML3 217 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ACADMP11310 421 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 PRPS2P11908 318 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SDHBP21912 280 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MAPK4P31152 587 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MAGEA4P43358 317 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 RABIFP47224 123 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CAMLGP49069 296 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 AMPHP49418 695 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 NT5C2P49902 561 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ZNF165P49910 485 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 SCNN1BP51168 640 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 MFAP3P55082 362 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 TRA2BP62995 288 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 ATP8B2P98198 1209 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CHRNEQ04844 493 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 FSTL1Q12841 308 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
SF3B1-203ENST00000414174 CHAF1BQ13112 559 aa3.76□□□□□ -1.81
SF3B1-203ENST00000414174 DUSP4Q13115 394 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms