RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 NUAK2Q9H093 628 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 PNNQ9H307 717 aaKnown RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 RMI1Q9H9A7 625 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 USP29Q9HBJ7 922 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 FZD3Q9NPG1 666 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 NECTIN3Q9NQS3 549 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 DNMT3BQ9UBC3 853 aaKnown RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 MID2Q9UJV3 735 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 HDAC9Q9UKV0 1011 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC39A10Q9ULF5 831 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 MAGED2Q9UNF1 606 aaPredicted RBP2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 NUDCQ9Y266 331 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 MYOM3Q5VTT5 1437 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 ARAP1Q96P48 1450 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CECR2Q9BXF3 1484 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 SYNJ1O43426 1573 aa2.81□□□□□ -1.96
HMGB3P2-201ENST00000411913 CNTLNQ9NXG0 1405 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 A0A1W2PPC1 479 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCDC189A1A4V9 331 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 TLX3O43711 291 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 FRAT2O75474 233 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 IDEP14735 1019 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 TCEA1P23193 301 aaKnown RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ACVR2AP27037 513 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 GABRB3P28472 473 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 PDIA3P30101 505 aaKnown RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCT5P48643 541 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 PPM1FP49593 454 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 COMPP49747 757 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 CPT1AP50416 773 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC12A2P55011 1212 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 DSCR9P59020 149 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 FOXO1Q12778 655 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ARHGEF7Q14155 803 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ELF2Q15723 593 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZACNQ401N2 412 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 CCDC184Q52MB2 194 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 RRAGBQ5VZM2 374 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZDHHC24Q6UX98 284 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 RBM23Q86U06 439 aaKnown RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 CPXCR1Q8N123 301 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 DNAJB14Q8TBM8 379 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ELP5Q8TE02 316 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 SMCR8Q8TEV9 937 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 IPO4Q8TEX9 1081 aaKnown RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 RAPGEF4Q8WZA2 1011 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 PIGKQ92643 395 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 MUL1Q969V5 352 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 EDC3Q96F86 508 aaKnown RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 LRRC46Q96FV0 321 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 SNX27Q96L92 541 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 SCLT1Q96NL6 688 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 MAP7D2Q96T17 732 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 ISCA1Q9BUE6 129 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 VN1R3Q9BXE9 311 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 FAM83DQ9H4H8 585 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 C6orf106Q9H6K1 298 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 PRKRIP1Q9H875 184 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 AS3MTQ9HBK9 375 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 TBC1D23Q9NUY8 699 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 HIF1ANQ9NWT6 349 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 RGL1Q9NZL6 768 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 LUZP4Q9P127 313 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 DKK4Q9UBT3 224 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 PCDHGB1Q9Y5G3 927 aa2.8□□□□□ -1.96
HMGB3P2-201ENST00000411913 NCOA1Q15788 1441 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 AKNAQ7Z591 1439 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 A0A087WZ62 844 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 FAM234BA2RU67 622 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 AQP7P3A6NL99 342 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 H0YGN5 161 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 RAB27BO00194 218 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 SYT5O00445 386 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 PODXLO00592 558 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 NPC1O15118 1278 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 NDST3O95803 873 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 HSD3B1P14060 373 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 TPH1P17752 444 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 SERPINF1P36955 418 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 RIPK4P57078 832 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 TIRAPP58753 221 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 GALNT1Q10472 559 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 PTK2BQ14289 1009 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 SPARCL1Q14515 664 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 RAB30Q15771 203 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 PFKFB4Q16877 469 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 SLC4A8Q2Y0W8 1093 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 ODF3L2Q3SX64 289 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 ARL6IP4Q66PJ3 421 aaKnown RBP2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 NUGGCQ68CJ6 796 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 PLAG1Q6DJT9 500 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 GGT6Q6P531 493 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 FBXO38Q6PIJ6 1188 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 LDHAL6AQ6ZMR3 332 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 KIAA0408Q6ZU52 694 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 ZNF354CQ86Y25 554 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 ADGRF4Q8IZF3 695 aa2.79□□□□□ -1.96
HMGB3P2-201ENST00000411913 CACNA2D3Q8IZS8 1091 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms