RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OSGIN2Q9Y236 505 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 CNPY2Q9Y2B0 182 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC45A1Q9Y2W3 748 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 LAMC3Q9Y6N6 1575 aa5.21□□□□□ -1.58
HMGB3P18-201ENST00000406327 URB2Q14146 1524 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CENPVL1A0A0U1RR11 272 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 TNPO2O14787 897 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCNDBP1O95273 360 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 C1RP00736 705 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 IGFBP2P18065 325 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 NR4A1P22736 598 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ZFP36P26651 326 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ARL3P36405 182 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 STAT1P42224 750 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 AVPR1BP47901 424 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DIO1P49895 249 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 RPS6KA3P51812 740 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 OAZ1P54368 228 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DRG2P55039 364 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 SETQ01105 290 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 NUCB1Q02818 461 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DEUP1Q05D60 604 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CDK18Q07002 472 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ERV3-1Q14264 604 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 LRRC24Q50LG9 513 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC45A4Q5BKX6 768 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 GPATCH4Q5T3I0 446 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 FAM69AQ5T7M9 428 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ATF7IPQ6VMQ6 1270 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC39A5Q6ZMH5 540 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 B4GALNT4Q76KP1 1039 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ADGRG6Q86SQ4 1221 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 RPAP2Q8IXW5 612 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 NGEFQ8N5V2 710 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ANKRD52Q8NB46 1076 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ASB10Q8WXI3 467 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DVL3Q92997 716 aaPredicted RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CUL5Q93034 780 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 Q96MF0 132 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 BARD1Q99728 777 aaKnown RBP5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 FSD1LQ9BXM9 530 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CLPBQ9H078 707 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CCDC68Q9H2F9 335 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DUSP22Q9NRW4 184 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DIAPH3Q9NSV4 1193 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 SERTAD4Q9NUC0 356 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 ABHD10Q9NUJ1 306 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 SMPD4Q9NXE4 827 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 CLIC5Q9NZA1 410 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 DKK3Q9UBP4 350 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 NRBP1Q9UHY1 535 aa5.2□□□□□ -1.58
HMGB3P18-201ENST00000406327 GCOM1H8Y6P7 765 aaPredicted RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 DHX16O60231 1041 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ACADMP11310 421 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ENGP17813 658 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 CYP2C18P33260 490 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 GALNSP34059 522 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 EEFSECP57772 596 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 GPC5P78333 572 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 RAE1P78406 368 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC25A3Q00325 362 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 CFHR3Q02985 330 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 PLP2Q04941 152 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 LMAN2Q12907 356 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 MPP3Q13368 585 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 EIF4A2Q14240 407 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 R3HDM1Q15032 1099 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 PTPAQ15257 358 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 TOMM20Q15388 145 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 CNGA3Q16281 694 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 AARS2Q5JTZ9 985 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 Q6ZNX1 250 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 RNF207Q6ZRF8 634 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 CPLX4Q7Z7G2 160 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 DIS3L2Q8IYB7 885 aaKnown RBP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 LCORLQ8N3X6 602 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ETNPPLQ8TBG4 499 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 PROKR1Q8TCW9 393 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 NCSTNQ92542 709 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 AKAP1Q92667 903 aaKnown RBP eCLIP5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 PLEKHG4BQ96PX9 1271 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 SDF4Q9BRK5 362 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ELOVL1Q9BW60 279 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ADGRE3Q9BY15 652 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 TRIM2Q9C040 744 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 SFXN1Q9H9B4 322 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 THAP1Q9NVV9 213 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 TBC1D14Q9P2M4 693 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 SLC25A13Q9UJS0 675 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ASAP1Q9ULH1 1129 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 FZD4Q9ULV1 537 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 ADAMTS5Q9UNA0 930 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 RCE1Q9Y256 329 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 SPATA31A1Q5TZJ5 1347 aa5.19□□□□□ -1.58
HMGB3P18-201ENST00000406327 PRDM2Q13029 1718 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 RRBP1Q9P2E9 1410 aaKnown RBP5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 A6NCN8 305 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 SUV39H1O43463 412 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 HBP1O60381 514 aa5.18□□□□□ -1.58
HMGB3P18-201ENST00000406327 GFPT2O94808 682 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms