RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 AGKQ53H12 422 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 TRIQKQ629K1 86 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM228AQ86W67 206 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MARCH10Q8NA82 808 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 FBXO25Q8TCJ0 367 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DEPDC7Q96QD5 511 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 NT5MQ9NPB1 228 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 VPS28Q9UK41 221 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RIMS1Q86UR5 1692 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC12A8A0AV02 714 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 EIF4E1BA6NMX2 242 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 E9PBE3 544 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 H3BQF6 201 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ACKR2O00590 384 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 FCHO1O14526 889 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CCNA2P20248 432 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CYP2B6P20813 491 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MAPK9P45984 424 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RPL14P50914 215 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GRIK4Q16099 956 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SH3RF1Q7Z6J0 888 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DSG4Q86SJ6 1040 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF75CPQ92670 426 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ACSF2Q96CM8 615 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MRIQ9BWK5 157 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 POPDC2Q9HBU9 364 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ABCC13Q9NSE7 274 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 UBA2Q9UBT2 640 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SFMBT1Q9UHJ3 866 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PADI4Q9UM07 663 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MFHAS1Q9Y4C4 1052 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC28A1O00337 649 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF682O95780 498 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SLC2A4P14672 509 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CSE1LP55060 971 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 UBE3AQ05086 875 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 TRAF2Q12933 501 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 FAM187BQ17R55 369 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 KCNT1Q5JUK3 1230 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PCID2Q5JVF3 399 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ARMC3Q5W041 872 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ADHFE1Q8IWW8 467 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 NKAPQ8N5F7 415 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZNF655Q8N720 491 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CPB2Q96IY4 423 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PDCD2LQ9BRP1 358 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 C1QTNF7Q9BXJ2 289 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MYLK2Q9H1R3 596 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DDX43Q9NXZ2 648 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GNPTGQ9UJJ9 305 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 TSPAN16Q9UKR8 245 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 C15orf41Q9Y2V0 281 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GNG14A0A1W2PPG7 69 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 IRGMA1A4Y4 181 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DCDC2CA8MYV0 355 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PHGDHO43175 533 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RAMP2O60895 175 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ITGAVP06756 1048 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DARSP14868 501 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ETS1P14921 441 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ITGB6P18564 788 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ACAT1P24752 427 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ELK3P41970 407 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ATXN3P54252 364 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RPS7P62081 194 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GNASQ5JWF2 1037 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ARHGEF19Q8IW93 802 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ATG16L2Q8NAA4 619 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 GINS4Q9BRT9 223 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CRNNQ9UBG3 495 aaPredicted RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RPS6KA6Q9UK32 745 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SMIM22K7EJ46 135 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 MRASO14807 208 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 UQCRBP14927 111 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 RAG1P15918 1043 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 HALP42357 657 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CLCN5P51795 746 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 DRG2P55039 364 aaKnown RBP8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PSMC6P62333 389 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 FAXCQ5TGI0 409 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 NEK5Q6P3R8 708 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SV2AQ7L0J3 742 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 CHMP1BQ7LBR1 199 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 OTOP1Q7RTM1 612 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 C10orf53Q8N6V4 93 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 WDR60Q8WVS4 1066 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 PNMA5Q96PV4 448 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 POMKQ9H5K3 350 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 HMG20AQ9NP66 347 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 OSGEPQ9NPF4 335 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 LRRC4BQ9NT99 713 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ATAD3AQ9NVI7 634 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 ZSCAN32Q9NX65 697 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 TRPV2Q9Y5S1 764 aa8.53□□□□□ -1.04
SPTLC3-201ENST00000399002 SMIM31A0A1B0GVY4 71 aa8.52□□□□□ -1.04
SPTLC3-201ENST00000399002 EFCAB10A6NFE3 127 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms