RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 C11orf84Q9BUA3 381 aaPredicted RBP20.05■□□□□ 0.8
COL13A1-205ENST00000398978 NFKBIZQ9BYH8 718 aa20.05■□□□□ 0.8
COL13A1-205ENST00000398978 TUT1Q9H6E5 874 aaKnown RBP20.05■□□□□ 0.8
COL13A1-205ENST00000398978 MKS1Q9NXB0 559 aa20.05■□□□□ 0.8
COL13A1-205ENST00000398978 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.05■□□□□ 0.8
COL13A1-205ENST00000398978 FAM72CH0Y354 149 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ATP9BO43861 1147 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 DGKIO75912 1065 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 GNL1P36915 607 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 CUL3Q13618 768 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 LBRQ14739 615 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 FAM72AQ5TYM5 149 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 PDPK2PQ6A1A2 396 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 FAM72DQ6L9T8 149 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 KYAT3Q6YP21 454 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 CATSPER4Q7RTX7 472 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 FAM72BQ86X60 149 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 DEFB107AQ8IZN7 70 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 DCLK2Q8N568 766 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ZNF781Q8N8C0 355 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 NLGN2Q8NFZ4 835 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 GATA6Q92908 595 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ZNF669Q96BR6 464 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ECSITQ9BQ95 431 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 RNF39Q9H2S5 420 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 USP3Q9Y6I4 520 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 NEMP1O14524 444 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 GLRA3O75311 464 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 CHRM1P11229 460 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 RALBP11234 206 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 BAG6P46379 1132 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ATXN3P54252 364 aaPredicted RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SARNPP82979 210 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 FRMD7Q6ZUT3 714 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 MARK2Q7KZI7 788 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ARCQ7LC44 396 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 LINC01465Q8N7H1 131 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 KBTBD7Q8WVZ9 684 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SNX10Q9Y5X0 201 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 STK10O94804 968 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SLC25A27O95847 323 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 DSG1Q02413 1049 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 BST2Q10589 180 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ZRSR2Q15696 482 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 MARCH8Q5T0T0 291 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SLC26A9Q7LBE3 791 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 PIGZQ86VD9 579 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 MAPK15Q8TD08 544 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 PPP4R1Q8TF05 950 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 OLFM3Q96PB7 478 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 C16orf70Q9BSU1 422 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 ZCWPW1Q9H0M4 648 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SNX15Q9NRS6 342 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 SPATS2LQ9NUQ6 558 aaKnown RBP20.04■□□□□ 0.8
COL13A1-205ENST00000398978 COPG2Q9UBF2 871 aa20.04■□□□□ 0.8
COL13A1-205ENST00000398978 RECQL4O94761 1208 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 PTPN9P43378 593 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 COPAP53621 1224 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 ASPHQ12797 758 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 GRIK4Q16099 956 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 SLC9B1Q4ZJI4 515 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 RNF169Q8NCN4 708 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 RNF139Q8WU17 664 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 ATP2A3Q93084 1043 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 MFSD3Q96ES6 412 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 ADAMTS6Q9UKP5 1117 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 F8W8V4 182 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 ZBTB14O43829 449 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 RNASEH1O60930 286 aaKnown RBP20.03■□□□□ 0.8
COL13A1-205ENST00000398978 SERPINE1P05121 402 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 AOC1P19801 751 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 NR2C2P49116 596 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 SFT2D3Q587I9 215 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 HSP90AA5PQ58FG0 334 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 CFAP157Q5JU67 520 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 EFHC1Q5JVL4 640 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 C9orf57Q5W0N0 161 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 TAPT1Q6NXT6 567 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 LRRC8BQ6P9F7 803 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 TIFABQ6ZNK6 161 aa20.03■□□□□ 0.8
COL13A1-205ENST00000398978 CENPIQ92674 756 aaPredicted RBP20.03■□□□□ 0.8
COL13A1-205ENST00000398978 M0QYT0 321 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 LYNP07948 512 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 GSTA2P09210 222 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 SERPINB6P35237 376 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 GRM5P41594 1212 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 MAMDC4Q6UXC1 1216 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 STRA8Q7Z7C7 330 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 DNAAF3Q8N9W5 541 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 ANKRD52Q8NB46 1076 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 ANLNQ9NQW6 1124 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 PAPOLBQ9NRJ5 636 aaKnown RBP20.02■□□□□ 0.8
COL13A1-205ENST00000398978 KLHL8Q9P2G9 620 aaPredicted RBP20.02■□□□□ 0.8
COL13A1-205ENST00000398978 RGS17Q9UGC6 210 aaPredicted RBP20.02■□□□□ 0.8
COL13A1-205ENST00000398978 FZD10Q9ULW2 581 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 ALDH1A2O94788 518 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 LTFP02788 710 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 ZFXP17010 805 aaPredicted RBP20.02■□□□□ 0.8
COL13A1-205ENST00000398978 PGAM1P18669 254 aa20.02■□□□□ 0.8
COL13A1-205ENST00000398978 ABCE1P61221 599 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms