RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PSTKQ8IV42 348 aaKnown RBP19.33■□□□□ 0.69
CBX1-202ENST00000393408 DEFB106AQ8N104 65 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 GPC2Q8N158 579 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 OR6Y1Q8NGX8 325 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 PGBD4Q96DM1 585 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 CERS2Q96G23 380 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 TRAPPC9Q96Q05 1148 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 PDP2Q9P2J9 529 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 GJD2Q9UKL4 321 aa19.33■□□□□ 0.69
CBX1-202ENST00000393408 ADM5C9JUS6 153 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 KIF3CO14782 793 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 POLBP06746 335 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 LYNP07948 512 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 UBTFL6P0CB48 400 aaPredicted RBP19.33■□□□□ 0.68
CBX1-202ENST00000393408 GNAT1P11488 350 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 LMO2P25791 158 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 MAGEA12P43365 314 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 SULT1E1P49888 294 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 OTUD1Q5VV17 481 aaPredicted RBP19.33■□□□□ 0.68
CBX1-202ENST00000393408 PDPK2PQ6A1A2 396 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 EP400NLQ6ZTU2 488 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 RAPH1Q70E73 1250 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 ZNF567Q8N184 647 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 RNF139Q8WU17 664 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 HSFY1Q96LI6 401 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 CPNE1Q99829 537 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 SEPT10Q9P0V9 454 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 TXNDC16Q9P2K2 825 aa19.33■□□□□ 0.68
CBX1-202ENST00000393408 PDCD11Q14690 1871 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 MX2P20592 715 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 GARSP41250 739 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 SPANXN3Q5MJ09 141 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 GRTP1Q5TC63 336 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 VWA5B1Q5TIE3 1220 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 SLC30A9Q6PML9 568 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 CES3Q6UWW8 571 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 ACTRT2Q8TDY3 377 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 ISL2Q96A47 359 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 EIF2AQ9BY44 585 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 TMPRSS4Q9NRS4 437 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 SNX15Q9NRS6 342 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 ZNF358Q9NW07 568 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 IGSF9Q9P2J2 1179 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 SF3B1O75533 1304 aaKnown RBP eCLIP19.32■□□□□ 0.68
CBX1-202ENST00000393408 GNL1P36915 607 aaPredicted RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 IREB2P48200 963 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 DEUP1Q05D60 604 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 ITGA9Q13797 1035 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 CCNIQ14094 377 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 PDK1Q15118 436 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 GRIK4Q16099 956 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 CMC1Q7Z7K0 106 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 DHDDSQ86SQ9 333 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 SLC2A14Q8TDB8 520 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 PYDC1Q8WXC3 89 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 NDRG1Q92597 394 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 FCRL3Q96P31 734 aaPredicted RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 FERMT1Q9BQL6 677 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 PRDM12Q9H4Q4 367 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 PAPOLBQ9NRJ5 636 aaKnown RBP19.32■□□□□ 0.68
CBX1-202ENST00000393408 RNF19AQ9NV58 838 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 HES2Q9Y543 173 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 RPS6KL1Q9Y6S9 549 aa19.32■□□□□ 0.68
CBX1-202ENST00000393408 H3BRB1 525 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 CPA3P15088 417 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 PITX1P78337 314 aaPredicted RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 HNRNPDQ14103 355 aaKnown RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 KIZQ2M2Z5 673 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 CCDC153Q494R4 210 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 SLC27A1Q6PCB7 646 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 RNF111Q6ZNA4 994 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 PAXIP1Q6ZW49 1069 aaPredicted RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 DCLK2Q8N568 766 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 CCNYQ8ND76 341 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 CMTM5Q96DZ9 223 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 TUT1Q9H6E5 874 aaKnown RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 ADAM28Q9UKQ2 775 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 KCNH4Q9UQ05 1017 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 DAB1O75553 588 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 PAPOLAP51003 745 aaKnown RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 EPHB1P54762 984 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 IFRD2Q12894 506 aaPredicted RBP19.31■□□□□ 0.68
CBX1-202ENST00000393408 ALKAL1Q6UXT8 129 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 PPP2R3CQ969Q6 453 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 RBBP8Q99708 897 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 CDH22Q9UJ99 828 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 PCDHB12Q9Y5F1 795 aa19.31■□□□□ 0.68
CBX1-202ENST00000393408 E2F8A0AVK6 867 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PDE5AO76074 875 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 SORBS2O94875 1100 aaKnown RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 ITGAXP20702 1163 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 CDK7P50613 346 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PAFAH1B3Q15102 231 aaKnown RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 FBXO47Q5MNV8 452 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 ZNF618Q5T7W0 954 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 PLD6Q8N2A8 252 aaKnown RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 EMID1Q96A84 441 aaPredicted RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 PGLYRP2Q96PD5 576 aa19.3■□□□□ 0.68
CBX1-202ENST00000393408 DDX50Q9BQ39 737 aaKnown RBP19.3■□□□□ 0.68
CBX1-202ENST00000393408 SHCBP1LQ9BZQ2 653 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms