RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 C2orf71A6NGG8 1288 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 RTCAO00442 366 aaKnown RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 SIPA1L1O43166 1804 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA12O60330 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 BMP10O95393 424 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 TBX18O95935 607 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 GSTT2P0CG29 244 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 GSTT2BP0CG30 244 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ALDH1A3P47895 512 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 HSPA13P48723 471 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 NUMBP49757 651 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 FAAP100Q0VG06 881 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 CCDC153Q494R4 210 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PARP10Q53GL7 1025 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 CIAPIN1Q6FI81 312 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 SNRNP48Q6IEG0 339 aaKnown RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 CATSPER3Q86XQ3 398 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 SCUBE3Q8IX30 993 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 C12orf56Q8IXR9 622 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 C1orf127Q8N9H9 656 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 C1orf162Q8NEQ5 155 aaPredicted RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ADCY4Q8NFM4 1077 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ADAMTS18Q8TE60 1221 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PYDC1Q8WXC3 89 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 APBB2Q92870 758 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ABTB1Q969K4 478 aaPredicted RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PSD2Q9BQI7 771 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 GRIP2Q9C0E4 1043 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 ZNF287Q9HBT7 754 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 DNAJC17Q9NVM6 304 aaKnown RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHA12Q9UN75 941 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 POMPQ9Y244 141 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA9Q9Y5G4 932 aaKnown RBP6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA8Q9Y5G5 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA7Q9Y5G6 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA6Q9Y5G7 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA3Q9Y5H0 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHGA2Q9Y5H1 932 aa6.87□□□□□ -1.31
CDKAL1-202ENST00000378610 LTBP3Q9NS15 1303 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GPR25O00155 361 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PPP1R11O60927 126 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 STARD3NLO95772 234 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 CYP19A1P11511 503 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 UNGP13051 313 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GAP43P17677 238 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 KRT15P19012 456 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 HIRAP54198 1017 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 CTBSQ01459 385 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PDIA2Q13087 525 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 SLC14A2Q15849 920 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 ZNF829Q3KNS6 432 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 THOC7Q6I9Y2 204 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GRAMD4Q6IC98 578 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GPR153Q6NV75 609 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 HEATR4Q86WZ0 1026 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 CARM1Q86X55 608 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 OR2C3Q8N628 320 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 STON2Q8WXE9 905 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 SHC3Q92529 594 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 BTBD6Q96KE9 485 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 ZNF641Q96N77 438 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PIGSQ96S52 555 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 WWP1Q9H0M0 922 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 SAYSD1Q9NPB0 183 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PCDHB14Q9Y5E9 798 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 COL16A1Q07092 1604 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 IQCA1LA6NCM1 817 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 ZNF891A8MT65 544 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 K7ESF4 209 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 EIF3FO00303 357 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 CYP26A1O43174 497 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GSRP00390 522 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 FUCA1P04066 466 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 ENO1P06733 434 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 C6orf222P0C671 652 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 YBX3P16989 372 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 HOXA10P31260 410 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PPM1AP35813 382 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PPARGP37231 505 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GRIK1P39086 918 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 NUP107P57740 925 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 BFSP1Q12934 665 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 KLHL38Q2WGJ6 581 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 ACAD10Q6JQN1 1059 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PDZD4Q76G19 769 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GPR180Q86V85 440 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PQLC1Q8N2U9 271 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 FBXW8Q8N3Y1 598 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 GLIS1Q8NBF1 620 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 CATSPER1Q8NEC5 780 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 NEDD1Q8NHV4 660 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 NKD2Q969F2 451 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 LENG9Q96B70 501 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 RADILQ96JH8 1075 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 SERAC1Q96JX3 654 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 FAM84BQ96KN1 310 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 RIPOR3Q96MK2 946 aa6.86□□□□□ -1.31
CDKAL1-202ENST00000378610 PAFAH2Q99487 392 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms