RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 OR6S1Q8NH40 331 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 DEPDC1BQ8WUY9 529 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 FAM83CQ9BQN1 747 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 FUT8Q9BYC5 575 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 IL37Q9NZH6 218 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CHMP2BQ9UQN3 213 aa9.29□□□□□ -0.92
UBR4-201ENST00000375218 CCDC171Q6TFL3 1326 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 MED7O43513 233 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TBX10O75333 385 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PDE8BO95263 885 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GNA14O95837 355 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 KRT4P19013 534 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 IL11P20809 199 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 THOP1P52888 689 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SCRN1Q12765 414 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SLC12A1Q13621 1099 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SLC44A4Q53GD3 710 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CIAPIN1Q6FI81 312 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TXNDC11Q6PKC3 985 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ARID3BQ8IVW6 561 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 CSGALNACT2Q8N6G5 542 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 RBBP8NLQ8NC74 664 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 MSANTD3Q96H12 275 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ZFYVE19Q96K21 471 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 YIPF3Q9GZM5 350 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 EHD4Q9H223 541 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CNOT7Q9UIV1 285 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 SPEF1Q9Y4P9 236 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 RAB19A4D1S5 217 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 VWA3AA6NCI4 1184 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GTPBP1O00178 669 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 DNAJB5O75953 348 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GAS8O95995 478 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 MMP2P08253 660 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CYC1P08574 325 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SRGAP2CP0DJJ0 459 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 FDPSP14324 419 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 RXRAP19793 462 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PDHA2P29803 388 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ADRA1BP35368 520 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 BUD31P41223 144 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 ZACNQ401N2 412 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 SLC7A14Q8TBB6 771 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ABHD1Q96SE0 405 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SUCLA2Q9P2R7 463 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 NARFQ9UHQ1 456 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SH3TC1Q8TE82 1336 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 A0A1B0GWJ7 208 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GOLGA8OA6NCC3 632 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GOLGA8CPA6NN73 597 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GOLGA8NF8WBI6 632 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SOCS6O14544 535 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ATP2A1O14983 1001 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CLN5O75503 358 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 RPS6KA4O75676 772 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CTNNB1P35222 781 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 NNMTP40261 264 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GIPRP48546 466 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GSDMDP57764 484 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SMARCB1Q12824 385 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 DARS2Q6PI48 645 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 PHLDB2Q86SQ0 1253 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 LSRQ86X29 649 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 PHTF2Q8N3S3 785 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TMX3Q96JJ7 454 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PCED1AQ9H1Q7 454 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TSPAN10Q9H1Z9 355 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 DENND2DQ9H6A0 471 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 CNTD2Q9H8S5 307 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 A1CFQ9NQ94 594 aaKnown RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 PAQR5Q9NXK6 330 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 TAB2Q9NYJ8 693 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 FOXD3Q9UJU5 478 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 MINPP1Q9UNW1 487 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 KIAA1217Q5T5P2 1943 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 ATAD5Q96QE3 1844 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 C2orf72A6NCS6 295 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 FAM205CA6NFA0 338 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PLD2O14939 933 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 NFICP08651 508 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 MAGEA4P43358 317 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 AARSP49588 968 aaKnown RBP eCLIP9.28□□□□□ -0.921e-7■□□□□ 8.7
UBR4-201ENST00000375218 NME5P56597 212 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CYP4F3Q08477 520 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CHIT1Q13231 466 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 EFHC1Q5JVL4 640 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 NBPF12Q5TAG4 269 aaPredicted RBP9.28□□□□□ -0.92
UBR4-201ENST00000375218 LILRA6Q6PI73 481 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TBC1D10CQ8IV04 446 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SPATA4Q8NEY3 305 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 GATAD2BQ8WXI9 593 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 SLC39A7Q92504 469 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 PPP2R3CQ969Q6 453 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 CCDC74AQ96AQ1 378 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TEKT5Q96M29 485 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 TMEM68Q96MH6 324 aa9.28□□□□□ -0.92
UBR4-201ENST00000375218 BCO2Q9BYV7 579 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms