RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 A0A096LPK6 155 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 SNX3O60493 162 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 CPA2P48052 419 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 TMEM62Q0P6H9 643 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 RASGEF1CQ8N431 466 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 PARVBQ9HBI1 364 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 MYRFQ9Y2G1 1151 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 DERAQ9Y315 318 aa12.29□□□□□ -0.44
CDC42BPA-203ENST00000366766 RECQL5O94762 991 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ALDH5A1P51649 535 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 SKP1P63208 163 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 PTP4A2Q12974 167 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 R3HDM1Q15032 1099 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 IQSEC1Q6DN90 963 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 C6orf203Q9P0P8 240 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 NDUFAF1Q9Y375 327 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 PEAK1Q9H792 1746 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 KPNA5O15131 536 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 KCNT2Q6UVM3 1135 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 MFSD14AQ96MC6 490 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 UROC1Q96N76 676 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 INPP4AQ96PE3 977 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 NUP188Q5SRE5 1749 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ATP6V1B1P15313 513 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 RPL14P50914 215 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 OR6Y1Q8NGX8 325 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 LHX5Q9H2C1 402 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CD248Q9HCU0 757 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CROTQ9UKG9 612 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 RNASEH1O60930 286 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CNOT3O75175 753 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 SKAP2O75563 359 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 EIF2S1P05198 315 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 HS6ST3Q8IZP7 471 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 WNT8BQ93098 351 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 RBM22Q9NW64 420 aaKnown RBP eCLIP12.28□□□□□ -0.441e-6■■■■□ 19.3
CDC42BPA-203ENST00000366766 LDLRP01130 860 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM153BP0C7A2 387 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 FAM153CQ494X1 144 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ARMCX4Q5H9R4 360 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 PPP1R15BQ5SWA1 713 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CAMK1DQ8IU85 385 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 NKX2-3Q8TAU0 364 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 MRPL57Q9BQC6 102 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CYP39A1Q9NYL5 469 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 E9PBE3 544 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 RPL3P39023 403 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZNF157P51786 506 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CAMK2GQ13555 558 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 AGKQ53H12 422 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 NSMCE2Q96MF7 247 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 TPRKBQ9Y3C4 175 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZSCAN5CA6NGD5 496 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 F8W810 466 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 LIASO43766 372 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 LRRC74AQ0VAA2 488 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 BSNDQ8WZ55 320 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 MTG1Q9BT17 334 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 SLC39A8Q9C0K1 460 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 ALOX15P16050 662 aaPredicted RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 EPHB3P54753 998 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 PPIL2Q13356 520 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 RIOX2Q8IUF8 465 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 LRRC52Q8N7C0 313 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 TBL1YQ9BQ87 522 aa12.28□□□□□ -0.44
CDC42BPA-203ENST00000366766 MEIS2O14770 477 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 TBX4P57082 545 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 TMEM161BQ8NDZ6 487 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 MAGEC3Q8TD91 643 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 MUC13Q9H3R2 512 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 KRT84Q9NSB2 600 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 DGKIO75912 1065 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 TGDSO95455 350 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 LTFP02788 710 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 CYP2A7P20853 494 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 ZACNQ401N2 412 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 PTCD2Q8WV60 388 aaKnown RBP12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 UBE2E3Q969T4 207 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 C2CD2LO14523 706 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 GALNTL6Q49A17 601 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 FETUBQ9UGM5 382 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 CLCA2Q9UQC9 943 aa12.27□□□□□ -0.44
CDC42BPA-203ENST00000366766 FASTKQ14296 549 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 CTXN3Q4LDR2 81 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 USP6NLQ92738 828 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ADAM33Q9BZ11 813 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 IL1RL2Q9HB29 575 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 ABCC13Q9NSE7 274 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 NR5A2O00482 541 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 TRAFD1O14545 582 aaPredicted RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 SERPINA6P08185 405 aa12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 RPL9P32969 192 aaKnown RBP12.27□□□□□ -0.45
CDC42BPA-203ENST00000366766 MAPK9P45984 424 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms