RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 LZTFL1Q9NQ48 299 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 FBXO10Q9UK96 956 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 NEU3Q9UQ49 428 aa22.86■■□□□ 1.25
SHMT1-203ENST00000354098 MTF2Q9Y483 593 aaPredicted RBP22.86■■□□□ 1.25
SHMT1-203ENST00000354098 TYW5A2RUC4 315 aaKnown RBP22.85■■□□□ 1.25
SHMT1-203ENST00000354098 CREB3O43889 395 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 CISD3P0C7P0 127 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 L1CAMP32004 1257 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 KDSRQ06136 332 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 C11orf63Q6NUN7 778 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 DAAM2Q86T65 1068 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 SFTPA1Q8IWL2 248 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 CCAR2Q8N163 923 aaKnown RBP22.85■■□□□ 1.25
SHMT1-203ENST00000354098 CARNMT1Q8N4J0 409 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 MSANTD3Q96H12 275 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 SHDQ96IW2 340 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 FOXQ1Q9C009 403 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.85■■□□□ 1.25
SHMT1-203ENST00000354098 DEC1Q9P2X7 70 aa22.85■■□□□ 1.25
SHMT1-203ENST00000354098 NDRG2Q9UN36 371 aaKnown RBP22.85■■□□□ 1.25
SHMT1-203ENST00000354098 GRID2IPA4D2P6 1211 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 MAN2B1O00754 1011 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 KRT86O43790 486 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 SLC1A1P43005 524 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 FSCBQ5H9T9 825 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 RWDD4Q6NW29 188 aaKnown RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PSTKQ8IV42 348 aaKnown RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 MFN1Q8IWA4 741 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PHTF2Q8N3S3 785 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PNKPQ96T60 521 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TSGA10Q9BZW7 698 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TBC1D17Q9HA65 648 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 KANSL1LA0AUZ9 987 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TMEM221A6NGB7 291 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 M0R296 226 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 SPOPO43791 374 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 LUC7L3O95232 432 aaKnown RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TNNT1P13805 278 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 EIF2DP41214 584 aaKnown RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 DGKGP49619 791 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PPP6R3Q5H9R7 873 aaPredicted RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TMEM196Q5HYL7 178 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TTC39BQ5VTQ0 682 aaPredicted RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 FSTL4Q6MZW2 842 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 LRRC57Q8N9N7 239 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TEKT4Q8WW24 435 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 EZH1Q92800 747 aaPredicted RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 ZYG11BQ9C0D3 744 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 KLHL11Q9NVR0 708 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PPARGC1AQ9UBK2 798 aaKnown RBP22.84■■□□□ 1.25
SHMT1-203ENST00000354098 PYCARDQ9ULZ3 195 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 CAPN6Q9Y6Q1 641 aa22.84■■□□□ 1.25
SHMT1-203ENST00000354098 TECTAO75443 2155 aa22.83■■□□□ 1.25
SHMT1-203ENST00000354098 F5P12259 2224 aa22.83■■□□□ 1.25
SHMT1-203ENST00000354098 A0A1B0GVM2 712 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 ANTXRLA6NF34 631 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 TCAF2A6NFQ2 919 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 STK25O00506 426 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 TARSP26639 723 aaKnown RBP22.83■■□□□ 1.24
SHMT1-203ENST00000354098 HLA-FP30511 346 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 ZNF662Q6ZS27 426 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 TFAP2DQ7Z6R9 452 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 ZNF687Q8N1G0 1237 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 CALR3Q96L12 384 aaKnown RBP22.83■■□□□ 1.24
SHMT1-203ENST00000354098 ARHGEF4Q9NR80 690 aa22.83■■□□□ 1.24
SHMT1-203ENST00000354098 H0Y626 953 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 PALMO75781 387 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 GOT1P17174 413 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 CDH4P55283 916 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 UBXN2BQ14CS0 331 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 DPYSL2Q16555 572 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 GRAMD4Q6IC98 578 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 RNF10Q8N5U6 811 aaKnown RBP22.82■■□□□ 1.24
SHMT1-203ENST00000354098 FLCNQ8NFG4 579 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 OR52K2Q8NGK3 314 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 FIBINQ8TAL6 211 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 KIAA1524Q8TCG1 905 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 TBC1D31Q96DN5 1066 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 EPAS1Q99814 870 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 SLC2A11Q9BYW1 496 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 LTB4R2Q9NPC1 389 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 ABCB8Q9NUT2 735 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 ZNF212Q9UDV6 495 aa22.82■■□□□ 1.24
SHMT1-203ENST00000354098 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.82■■□□□ 1.244e-6■■■■□ 19.9
SHMT1-203ENST00000354098 MIA3Q5JRA6 1907 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.81■■□□□ 1.24
SHMT1-203ENST00000354098 CLDN11O75508 207 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 KAT7O95251 611 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 EGFP01133 1207 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 KRT7P08729 469 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 CD48P09326 243 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 EPHB2P29323 1055 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 CD70P32970 193 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 CDH18Q13634 790 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 C1orf228Q6PIY5 440 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 CHST9Q7L1S5 443 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 LMLNQ96KR4 655 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 MFSD1Q9H3U5 465 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 PCDH18Q9HCL0 1135 aa22.81■■□□□ 1.24
SHMT1-203ENST00000354098 NDFIP2Q9NV92 336 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms