RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 SND1Q7KZF4 910 aaKnown RBP eCLIP18.41■□□□□ 0.543e-10■■■■□ 20.5
CKLF-202ENST00000345436 GANCQ8TET4 914 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 CNTNAP3BQ96NU0 1288 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 CNTNAP3Q9BZ76 1288 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 BTBD1Q9H0C5 482 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 NUCKS1Q9H1E3 243 aaKnown RBP18.41■□□□□ 0.54
CKLF-202ENST00000345436 MIR1-1HGQ9H1L0 117 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 PRSS16Q9NQE7 514 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 DDIT4Q9NX09 232 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 PLXND1Q9Y4D7 1925 aa18.41■□□□□ 0.54
CKLF-202ENST00000345436 TARSL2A2RTX5 802 aaKnown RBP18.4■□□□□ 0.54
CKLF-202ENST00000345436 KCNJ18B7U540 433 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 FOXN3O00409 490 aaPredicted RBP18.4■□□□□ 0.54
CKLF-202ENST00000345436 PMLP29590 882 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 CSKP41240 450 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 SGSHP51688 502 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 RAPGEF1Q13905 1077 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 KCNJ12Q14500 433 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 PTPRNQ16849 979 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 DPCR1Q3MIW9 517 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 ACBD5Q5T8D3 534 aaPredicted RBP18.4■□□□□ 0.54
CKLF-202ENST00000345436 DCAF12L1Q5VU92 463 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 RAP1GAP2Q684P5 730 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 PASD1Q8IV76 773 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 FAM71AQ8IYT1 594 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 DEFB106AQ8N104 65 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 MINDY1Q8N5J2 469 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 ANKRD20A12PQ8NF67 263 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 SLC2A13Q96QE2 648 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 CPXM1Q96SM3 734 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 SGK2Q9HBY8 427 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 ACP6Q9NPH0 428 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 CYTH4Q9UIA0 394 aa18.4■□□□□ 0.54
CKLF-202ENST00000345436 CNOT1A5YKK6 2376 aaKnown RBP18.39■□□□□ 0.53
CKLF-202ENST00000345436 BCAT2O15382 392 aaPredicted RBP18.39■□□□□ 0.53
CKLF-202ENST00000345436 F9P00740 461 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 IGLV3-25P01717 112 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 NOS2P35228 1153 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 ECT2LQ008S8 904 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 SLC6A3Q01959 620 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 ZNF252P-AS1Q0IIN9 211 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 TEAD4Q15561 434 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 FAM124AQ86V42 546 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 WDTC1Q8N5D0 677 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 PRICKLE1Q96MT3 831 aaPredicted RBP18.39■□□□□ 0.53
CKLF-202ENST00000345436 DNAAF2Q9NVR5 837 aaKnown RBP18.39■□□□□ 0.53
CKLF-202ENST00000345436 STAP1Q9ULZ2 295 aa18.39■□□□□ 0.53
CKLF-202ENST00000345436 LAMA1P25391 3075 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 GON4LQ3T8J9 2241 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 SYNJ2BP-COX16A0A087WUM0 186 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 C7P10643 843 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 MAOBP27338 520 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 CLCN1P35523 988 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 RPS14P62263 151 aaKnown RBP18.38■□□□□ 0.53
CKLF-202ENST00000345436 SEMA3BQ13214 749 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 ARID5BQ14865 1188 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 DRAP1Q14919 205 aaPredicted RBP18.38■□□□□ 0.53
CKLF-202ENST00000345436 HNRNPA1L2Q32P51 320 aaKnown RBP18.38■□□□□ 0.53
CKLF-202ENST00000345436 TCP11X2Q5H9J9 407 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 PITRM1Q5JRX3 1037 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 KLHDC7AQ5VTJ3 777 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 USP30Q70CQ3 517 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 SLC26A9Q7LBE3 791 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 SLC47A2Q86VL8 602 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 CACUL1Q86Y37 369 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 DEFB124Q8NES8 71 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 ZNF397Q8NF99 534 aaPredicted RBP18.38■□□□□ 0.53
CKLF-202ENST00000345436 SIX2Q9NPC8 291 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 COX16Q9P0S2 106 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 ERVW-1Q9UQF0 538 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 PCDHB9Q9Y5E1 797 aa18.38■□□□□ 0.53
CKLF-202ENST00000345436 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 EDDM13A0A1B0GTR0 161 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 A0A1B0GVM2 712 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 TCAF2A6NFQ2 919 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 SEMA4FO95754 770 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 CER1O95813 267 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 MATKP42679 507 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 AFF3P51826 1226 aaKnown RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 APBA1Q02410 837 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 NME3Q13232 169 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 ZNF177Q13360 481 aaPredicted RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 TAF5Q15542 800 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 FKBP15Q5T1M5 1219 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 FAM183BPQ6ZVS7 135 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 ERICH1Q86X53 443 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 ZNF366Q8N895 744 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 ENOX1Q8TC92 643 aaKnown RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 WFDC5Q8TCV5 224 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 SNX19Q92543 992 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 SKA1Q96BD8 255 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 C18orf8Q96DM3 657 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 LMLNQ96KR4 655 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 RPRD1AQ96P16 312 aaPredicted RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 STK33Q9BYT3 514 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 RSPH9Q9H1X1 276 aaPredicted RBP18.37■□□□□ 0.53
CKLF-202ENST00000345436 CD93Q9NPY3 652 aa18.37■□□□□ 0.53
CKLF-202ENST00000345436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms