RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CSKP41240 450 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 GCNT1Q02742 428 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 SCAPQ12770 1279 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 SYPL2Q5VXT5 272 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 DENND1BQ6P3S1 775 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 LAYNQ6UX15 382 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 CCNI2Q6ZMN8 369 aaPredicted RBP18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 MMS22LQ6ZRQ5 1243 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 MFN1Q8IWA4 741 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 ELOA2Q8IYF1 753 aaPredicted RBP18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 CFAP52Q8N1V2 620 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 HJURPQ8NCD3 748 aaPredicted RBP18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 GOLGA1Q92805 767 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 MRGPRX3Q96LB0 322 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 RSPH9Q9H1X1 276 aaPredicted RBP18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 OSGEPQ9NPF4 335 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 TOR4AQ9NXH8 423 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 XPO7Q9UIA9 1087 aaKnown RBP18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 CNTN6Q9UQ52 1028 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 TLR6Q9Y2C9 796 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 BTBD3Q9Y2F9 522 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 ANKRD6Q9Y2G4 727 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 PCDHGB2Q9Y5G2 931 aa18.11■□□□□ 0.49
EXOSC4-201ENST00000316052 URB1O60287 2271 aaKnown RBP18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 ATXN1LP0C7T5 689 aaKnown RBP18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 CD27P26842 260 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 CTSOP43234 321 aaPredicted RBP18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 CETN1Q12798 172 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 KCNH2Q12809 1159 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 DCAF6Q58WW2 860 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 MS4A13Q5J8X5 152 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 ZNF776Q68DI1 518 aaPredicted RBP18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 TRIM59Q8IWR1 403 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 CARNMT1Q8N4J0 409 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 RHBDD1Q8TEB9 315 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 SGK2Q9HBY8 427 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 ST7Q9NRC1 585 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 SERGEFQ9UGK8 458 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 APOBEC2Q9Y235 224 aaKnown RBP18.1■□□□□ 0.49
EXOSC4-201ENST00000316052 SIN3BO75182 1162 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 MOCS2O96007 188 aaPredicted RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 IGHV4-34P06331 123 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 HOXB3P14651 431 aaPredicted RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 STX17P56962 302 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 MORC3Q14149 939 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 HNRNPA1L2Q32P51 320 aaKnown RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 TTC31Q49AM3 519 aaPredicted RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 C9orf64Q5T6V5 341 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 FOXR2Q6PJQ5 311 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 PROSER1Q86XN7 944 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 FAM149B1Q96BN6 582 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 SERPINB11Q96P15 392 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 DDX50Q9BQ39 737 aaKnown RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 INTS2Q9H0H0 1204 aaKnown RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 KIAA1522Q9P206 1035 aaPredicted RBP18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 CTNND2Q9UQB3 1225 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 ERVW-1Q9UQF0 538 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 PLXNA2O75051 1894 aa18.09■□□□□ 0.49
EXOSC4-201ENST00000316052 ASXL3Q9C0F0 2248 aa18.08■□□□□ 0.49
EXOSC4-201ENST00000316052 IGSF10Q6WRI0 2623 aa18.08■□□□□ 0.49
EXOSC4-201ENST00000316052 TTC34A8MYJ7 566 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 BIN1O00499 593 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 PAPSS1O43252 624 aaPredicted RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 DKK1O94907 266 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 KRT5P13647 590 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 PPP1R2P41236 205 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 GRIA4P48058 902 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 NUCB2P80303 420 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 NNTQ13423 1086 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 TEAD4Q15561 434 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 ZC3H12AQ5D1E8 599 aaKnown RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 PITRM1Q5JRX3 1037 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 USP30Q70CQ3 517 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 DHX40Q8IX18 779 aaKnown RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 ZNF557Q8N988 423 aaPredicted RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 GANCQ8TET4 914 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 SLC4A5Q9BY07 1137 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 UBE2TQ9NPD8 197 aaPredicted RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 ACP6Q9NPH0 428 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 FBXL12Q9NXK8 326 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 SLCO3A1Q9UIG8 710 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 DOCK9Q9BZ29 2069 aa18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 TP53BP1Q12888 1972 aaPredicted RBP18.08■□□□□ 0.48
EXOSC4-201ENST00000316052 FAM47DPA6NHR8 397 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 H0Y8X5 98 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 MID1O15344 667 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 FLRT2O43155 660 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 LUC7L3O95232 432 aaKnown RBP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 AFPP02771 609 aaKnown RBP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ASLP04424 464 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ACADSBP45954 432 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 GALCP54803 685 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 MARSP56192 900 aaKnown RBP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ST8SIA6P61647 398 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 PITX1P78337 314 aaPredicted RBP18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 CDH18Q13634 790 aa18.07■□□□□ 0.48
EXOSC4-201ENST00000316052 ARID5BQ14865 1188 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms