RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 GABBR2O75899 941 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 FYNP06241 537 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 CD70P32970 193 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 COPAP53621 1224 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 RPS24P62847 133 aaKnown RBP13.13□□□□□ -0.31
CKS2-201ENST00000314355 SUZ12Q15022 739 aaKnown RBP13.13□□□□□ -0.31
CKS2-201ENST00000314355 RAP1GAP2Q684P5 730 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 DEFB106AQ8N104 65 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 CFAP52Q8N1V2 620 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 KDM1BQ8NB78 822 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 DEFB124Q8NES8 71 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 DNASE2BQ8WZ79 361 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 TTC17Q96AE7 1141 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 SGK2Q9HBY8 427 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 CAPN10Q9HC96 672 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 PRSS16Q9NQE7 514 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 CACNA1AO00555 2505 aa13.13□□□□□ -0.31
CKS2-201ENST00000314355 UPK3BL1B0FP48 263 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 KCNJ18B7U540 433 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 UPK3BL2E5RIL1 263 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 FOXN3O00409 490 aaPredicted RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 TRIM16O95361 564 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 CER1O95813 267 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 F9P00740 461 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 IGLV3-19P01714 112 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 EEF1GP26641 437 aaKnown RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 PMLP29590 882 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 NOS2P35228 1153 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 CSKP41240 450 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 ECT2LQ008S8 904 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 SLC6A3Q01959 620 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 FOXC1Q12948 553 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 NME3Q13232 169 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 KCNJ12Q14500 433 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 FKBP15Q5T1M5 1219 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 ACBD5Q5T8D3 534 aaPredicted RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 NADSYN1Q6IA69 706 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 ADAT2Q7Z6V5 191 aaKnown RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 ZNF366Q8N895 744 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 C1orf131Q8NDD1 294 aaKnown RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 P2RY11Q96G91 374 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 OMDQ99983 421 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 NUCKS1Q9H1E3 243 aaKnown RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 WDCPQ9H6R7 721 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 ACP6Q9NPH0 428 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 EIF2B4Q9UI10 523 aaKnown RBP13.12□□□□□ -0.31
CKS2-201ENST00000314355 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
CKS2-201ENST00000314355 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 EDDM13A0A1B0GTR0 161 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 BECN2A8MW95 431 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 M0QYT0 321 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 GIPC1O14908 333 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 GRAP2O75791 330 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 FSBPO95073 299 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 SEMA4FO95754 770 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 SGSHP51688 502 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 RNASE9P60153 205 aaKnown RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 RPS14P62263 151 aaKnown RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 SHC2P98077 582 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 ZNF177Q13360 481 aaPredicted RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 PTPRNQ16849 979 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 HNRNPA1L2Q32P51 320 aaKnown RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 PITRM1Q5JRX3 1037 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 SASS6Q6UVJ0 657 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 LRRC31Q6UY01 552 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 USP30Q70CQ3 517 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 ERICH1Q86X53 443 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 IRF2BP1Q8IU81 584 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 ZCCHC9Q8N567 271 aaKnown RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 C18orf8Q96DM3 657 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 CPXM1Q96SM3 734 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 CD93Q9NPY3 652 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 FBXL12Q9NXK8 326 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.11□□□□□ -0.31
CKS2-201ENST00000314355 CYTH4Q9UIA0 394 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 SLC25A13Q9UJS0 675 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 FARP1Q9Y4F1 1045 aaPredicted RBP13.11□□□□□ -0.31
CKS2-201ENST00000314355 SPTBN2O15020 2390 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
CKS2-201ENST00000314355 CNOT1A5YKK6 2376 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 DCHS1Q96JQ0 3298 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 TCAF2A6NFQ2 919 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 FAM47DPA6NHR8 397 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 LRRC72A6NJI9 287 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 CLCN1P35523 988 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 MATKP42679 507 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 AFF3P51826 1226 aaKnown RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 KRT83P78385 493 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 SIM1P81133 766 aaPredicted RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 SEMA3BQ13214 749 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 DRAP1Q14919 205 aaPredicted RBP13.1□□□□□ -0.31
CKS2-201ENST00000314355 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 DPCR1Q3MIW9 517 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 ACCSLQ4AC99 568 aa13.1□□□□□ -0.31
CKS2-201ENST00000314355 KLHDC7AQ5VTJ3 777 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms