RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 C1QBPQ07021 282 aaKnown RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 NNTQ13423 1086 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF234Q14588 700 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 PPP2R5DQ14738 602 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 CCDC6Q16204 474 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 FAM182AQ5T1J6 154 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 CXorf57Q6NSI4 855 aaKnown RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SYT13Q7L8C5 426 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 DEFB119Q8N690 84 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ATP6V0D2Q8N8Y2 350 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 NELL1Q92832 810 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ELOVL2Q9NXB9 296 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 PCSK1NQ9UHG2 260 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SLCO3A1Q9UIG8 710 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 STAP1Q9ULZ2 295 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 MMP17Q9ULZ9 603 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SLC27A6Q9Y2P4 619 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ABCA7Q8IZY2 2146 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 A0A0D9SEW6 157 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 TCRBV21S2A2A0A5A6 115 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 H0Y626 953 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 RNF103O00237 685 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 MFAP3LO75121 409 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ENDOD1O94919 500 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 CALB1P05937 261 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 PABPC1P11940 636 aaKnown RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SDC4P31431 198 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 GBP1P32455 592 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 DGKEP52429 567 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ASTE1Q2TB18 679 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 MBLAC2Q68D91 279 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 PLEKHA7Q6IQ23 1121 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 C1orf228Q6PIY5 440 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SARM1Q6SZW1 724 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 TC2NQ8N9U0 490 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 ZBTB44Q8NCP5 570 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 HMGB4Q8WW32 186 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 CENPIQ92674 756 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 PGAP3Q96FM1 320 aaPredicted RBP12.44□□□□□ -0.42
SCFD1-201ENST00000311943 MYO19Q96H55 970 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 NENFQ9UMX5 172 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 SLC8A2Q9UPR5 921 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 NEU3Q9UQ49 428 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 STON1Q9Y6Q2 735 aa12.44□□□□□ -0.42
SCFD1-201ENST00000311943 F5H5T6 163 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 RTN2O75298 545 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 LUC7L3O95232 432 aaKnown RBP12.43□□□□□ -0.42
SCFD1-201ENST00000311943 HOXB2P14652 356 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 BCKDHBP21953 392 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 SCNN1AP37088 669 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 TNFRSF4P43489 277 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 FBXO43Q4G163 708 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 CCDC122Q5T0U0 273 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 RNF43Q68DV7 783 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 LEKR1Q6ZMV7 388 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 CYP4V2Q6ZWL3 525 aaPredicted RBP12.43□□□□□ -0.42
SCFD1-201ENST00000311943 SYNPOQ8N3V7 929 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 AZIN2Q96A70 460 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 DNAJC7Q99615 494 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
SCFD1-201ENST00000311943 FBXO4Q9UKT5 387 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 STARD13Q9Y3M8 1113 aa12.43□□□□□ -0.42
SCFD1-201ENST00000311943 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 TMEM191CA6NGB0 347 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 E9PAM4 449 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 CBFA2T2O43439 604 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SNAP91O60641 907 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 LATS1O95835 1130 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 GABRG2P18507 467 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ADRA1BP35368 520 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 PLA2G5P39877 138 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 GALCP54803 685 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 GSCP56915 257 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 SNX16P57768 344 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 CDH18Q13634 790 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ALKBH5Q6P6C2 394 aaKnown RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ANKS1BQ7Z6G8 1248 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 KIAA0907Q7Z7F0 614 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 HJURPQ8NCD3 748 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 OR8K1Q8NGG5 319 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ALG14Q96F25 216 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 MRGPRX3Q96LB0 322 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 OSGEPQ9NPF4 335 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 EBF1Q9UH73 591 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.42□□□□□ -0.423e-6■□□□□ 10.3
SCFD1-201ENST00000311943 MUC22E2RYF6 1773 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 TTC34A8MYJ7 566 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 K7ERQ8 282 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 MT-CO1P00395 513 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 CCDC172P0C7W6 258 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 IL1R2P27930 398 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 NTSR1P30989 418 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 HNRNPH3P31942 346 aaKnown RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 NBL1P41271 181 aa12.42□□□□□ -0.42
SCFD1-201ENST00000311943 ZNF143P52747 638 aaPredicted RBP12.42□□□□□ -0.42
SCFD1-201ENST00000311943 METAP1P53582 386 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms