RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 RASAL2Q9UJF2 1139 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 HHLA1C9JL84 531 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 TNFRSF10BO14763 440 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 MAGEA9P43362 315 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 LLGL1Q15334 1064 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 BOLA3Q53S33 107 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 CYP4V2Q6ZWL3 525 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-201ENST00000270061 JAMLQ86YT9 394 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 SIX6OS1Q8N1H7 587 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 TTC8Q8TAM2 541 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 RIN3Q8TB24 985 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FAM172AQ8WUF8 416 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 TBCBQ99426 244 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FAM83CQ9BQN1 747 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 ERP44Q9BS26 406 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 PNPLA8Q9NP80 782 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 CNGB3Q9NQW8 809 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FAM86C1Q9NVL1 165 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.46■■□□□ 1.673e-6■■■■□ 24.8
SSBP4-201ENST00000270061 PCSK1NQ9UHG2 260 aa25.46■■□□□ 1.67
SSBP4-201ENST00000270061 FEZ2Q9UHY8 353 aaPredicted RBP25.46■■□□□ 1.67
SSBP4-201ENST00000270061 ESYT3A0FGR9 886 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 PRPSAP2O60256 369 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 ENDOD1O94919 500 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 SOX9P48436 509 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 TKTL1P51854 596 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 NNTQ13423 1086 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 DUPD1Q68J44 220 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 TEKT4Q8WW24 435 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 OVCA2Q8WZ82 227 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 CLDN23Q96B33 292 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 PEBP4Q96S96 227 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 FAM114A2Q9NRY5 505 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 COMMD8Q9NX08 183 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 ARHGAP26Q9UNA1 814 aa25.45■■□□□ 1.66
SSBP4-201ENST00000270061 DAB1O75553 588 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 MATKP42679 507 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 ZNF77Q15935 545 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 SMTNL2Q2TAL5 461 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 ITPRIPL2Q3MIP1 535 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 KCNT1Q5JUK3 1230 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 RALGPS2Q86X27 583 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-201ENST00000270061 C1orf210Q8IVY1 113 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 C1orf54Q8WWF1 131 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 IFT81Q8WYA0 676 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 CAVIN3Q969G5 261 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 FAM53CQ9NYF3 392 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 IL37Q9NZH6 218 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 SPECC1L-ADORA2AF8WAN1 911 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 SASH3O75995 380 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 CTHP32929 405 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 RPS9P46781 194 aaKnown RBP25.44■■□□□ 1.66
SSBP4-201ENST00000270061 YWHAZP63104 245 aaKnown RBP25.44■■□□□ 1.66
SSBP4-201ENST00000270061 ATP11AP98196 1134 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 CDO1Q16878 200 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 DRICH1Q6PGQ1 229 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-201ENST00000270061 STRADAQ7RTN6 431 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 GSPT2Q8IYD1 628 aaKnown RBP25.44■■□□□ 1.66
SSBP4-201ENST00000270061 SCML4Q8N228 414 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 KCTD6Q8NC69 237 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 SH3RF2Q8TEC5 729 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 EBF3Q9H4W6 596 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 NFU1Q9UMS0 254 aa25.44■■□□□ 1.66
SSBP4-201ENST00000270061 KRT10P13645 584 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 ARSEP51690 589 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 HDAC4P56524 1084 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 USP4Q13107 963 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 FZD5Q13467 585 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 TRIM68Q6AZZ1 485 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 SYDE1Q6ZW31 735 aaPredicted RBP25.43■■□□□ 1.66
SSBP4-201ENST00000270061 VSIG1Q86XK7 387 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 ZNF687Q8N1G0 1237 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 GRK7Q8WTQ7 553 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 NT5C3BQ969T7 300 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 SLC2A13Q96QE2 648 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 PHOX2BQ99453 314 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 FBXO44Q9H4M3 255 aa25.43■■□□□ 1.66
SSBP4-201ENST00000270061 R3HDM2Q9Y2K5 976 aaKnown RBP25.43■■□□□ 1.66
SSBP4-201ENST00000270061 OAS1P00973 400 aaKnown RBP25.42■■□□□ 1.66
SSBP4-201ENST00000270061 NOS2P35228 1153 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 DAOAP59103 153 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 ADCY2Q08462 1091 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 RUNX3Q13761 415 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 CASP8Q14790 479 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 PDGFRLQ15198 375 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 TRADDQ15628 312 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 SLC25A52Q3SY17 297 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 ATL2Q8NHH9 583 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 TRIM51Q9BSJ1 452 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 RNF38Q9H0F5 515 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 HPS4Q9NQG7 708 aa25.42■■□□□ 1.66
SSBP4-201ENST00000270061 SPATA6Q9NWH7 488 aaPredicted RBP25.42■■□□□ 1.66
SSBP4-201ENST00000270061 ZFHX2Q9C0A1 2572 aaPredicted RBP25.42■■□□□ 1.66
SSBP4-201ENST00000270061 FAM92AA1XBS5 289 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 MDM4O15151 490 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 ECEL1O95672 775 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 OLFM2O95897 454 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 TCF3P15923 654 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 ECHS1P30084 290 aa25.41■■□□□ 1.66
SSBP4-201ENST00000270061 SLC7A9P82251 487 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms