RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC4A7Q9Y6M7 1214 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 RPS6KL1Q9Y6S9 549 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 CEP350Q5VT06 3117 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 B4GALT3O60512 393 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 RAMP2O60895 175 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 EFCAB14O75071 495 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 KRT38O76015 456 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 CHN1P15882 459 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 TPH1P17752 444 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 MDH1P40925 334 aaKnown RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 AIF1P55008 147 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 IL9RQ01113 521 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 DENND1CQ8IV53 801 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 CFAP52Q8N1V2 620 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 SLCO2A1Q92959 643 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 IFT43Q96FT9 208 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 TMEM175Q9BSA9 504 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 ZCWPW1Q9H0M4 648 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 TRABDQ9H4I3 376 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 NMUR1Q9HB89 426 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 NT5MQ9NPB1 228 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 RCOR3Q9P2K3 495 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 DNMT3LQ9UJW3 386 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 FAM72CH0Y354 149 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 GABBR2O75899 941 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 EPHB1P54762 984 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 FAM189BP81408 668 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 DEFB103AP81534 67 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 ZNF177Q13360 481 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 THOC5Q13769 683 aaKnown RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 FAM72AQ5TYM5 149 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 NUGGCQ68CJ6 796 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 FAM72DQ6L9T8 149 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 CES3Q6UWW8 571 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 RAPH1Q70E73 1250 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 TAS1R1Q7RTX1 841 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 TMEM173Q86WV6 379 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 FAM72BQ86X60 149 aa9.57□□□□□ -0.88
SSR3-201ENST00000265044 GABPB2Q8TAK5 448 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.886e-7■■■□□ 16.4
SSR3-201ENST00000265044 ZNF669Q96BR6 464 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 FRMD8Q9BZ67 464 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 PSMC3IPQ9P2W1 217 aaPredicted RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 IPO11Q9UI26 975 aaKnown RBP9.57□□□□□ -0.88
SSR3-201ENST00000265044 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 TMEM120BA0PK00 339 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 SDR42E2A6NKP2 422 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 H0Y626 953 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 ENDOD1O94919 500 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 HDCP19113 662 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 PTPN7P35236 360 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 KPNA1P52294 538 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 SEC24CP53992 1094 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 GEMIN4P57678 1058 aaKnown RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 XRCC4Q13426 336 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 RNASEH2BQ5TBB1 312 aaKnown RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 NCBP2-AS2Q69YL0 99 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 ITIH5Q86UX2 942 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 LRRC6Q86X45 466 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 LZTR1Q8N653 840 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TOX2Q96NM4 488 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 RTP3Q9BQQ7 232 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 CCSER2Q9H7U1 834 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TMEM30AQ9NV96 361 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 BCLAF3A2AJT9 711 aaKnown RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 SLC38A8A6NNN8 435 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 NKX3-2P78367 333 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TWF1Q12792 350 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 POLD3Q15054 466 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 MARC1Q5VT66 337 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 PLPP4Q5VZY2 271 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 NAPEPLDQ6IQ20 393 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 OR6P1Q8NGX9 317 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 LRRC8CQ8TDW0 803 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 RMDN1Q96DB5 314 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 DDX50Q9BQ39 737 aaKnown RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 PNPLA8Q9NP80 782 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TTC3P53804 2025 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TCRBV7S3A2A0A539 114 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 CBX4O00257 560 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 CHADO15335 359 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 POLBP06746 335 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 MGAT1P26572 445 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 ECHS1P30084 290 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 GARSP41250 739 aaKnown RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 IRAK1P51617 712 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 ZNF135P52742 658 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 GAD2Q05329 585 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 NR1H3Q13133 447 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 RABGAP1LQ5R372 815 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 GKAP1Q5VSY0 366 aaPredicted RBP9.56□□□□□ -0.88
SSR3-201ENST00000265044 RFWD3Q6PCD5 774 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 FAM47EQ6ZV65 393 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 C16orf59Q7L2K0 433 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 NTAN1Q96AB6 310 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 TTC17Q96AE7 1141 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 PKNOX2Q96KN3 472 aa9.56□□□□□ -0.88
SSR3-201ENST00000265044 C8orf48Q96LL4 319 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms