RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 ZFRQ96KR1 1074 aaKnown RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ENTPD7Q9NQZ7 604 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TMA7Q9Y2S6 64 aaKnown RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 FBXO21O94952 628 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 RARAP10276 462 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ITGAXP20702 1163 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ATP6V1C1P21283 382 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TRMT11Q7Z4G4 463 aaKnown RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ERO1BQ86YB8 467 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 KIAA0895Q8NCT3 520 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ADAM32Q8TC27 787 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TMC2Q8TDI7 906 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 APOL4Q9BPW4 351 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 SNTG2Q9NY99 539 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 VTI1BQ9UEU0 232 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 N6AMT1Q9Y5N5 214 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 GRK4P32298 578 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 ADIGQ0VDE8 80 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TMEM132BQ14DG7 1078 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 SAPCD2Q86UD0 394 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 CPNE1Q99829 537 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 NFKBIZQ9BYH8 718 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 GANQ9H2C0 597 aa18.36■□□□□ 0.53
COL5A3-201ENST00000264828 AGO4Q9HCK5 861 aaKnown RBP18.36■□□□□ 0.53
COL5A3-201ENST00000264828 TFRCP02786 760 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 MSH3P20585 1137 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 ACAT1P24752 427 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 PPP2R1BP30154 601 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CCR1P32246 355 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CAP2P40123 477 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 DGUOKQ16854 277 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CD302Q8IX05 232 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CDK20Q8IZL9 346 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 TSPAN16Q9UKR8 245 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 NWD1Q149M9 1564 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CES2O00748 559 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 PROCP04070 461 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 ETS1P14921 441 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 SERPINH1P50454 418 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CDK16Q00536 496 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 STX4Q12846 297 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 AKIRIN2Q53H80 203 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 ZNF470Q6ECI4 717 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 ARHGAP22Q7Z5H3 698 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 IZUMO1Q8IYV9 350 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 MRPS31Q92665 395 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 CIPCQ9C0C6 399 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 A0A087WZ62 844 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 MYL12BO14950 172 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 RPA3P35244 121 aaPredicted RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 MRPS22P82650 360 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 BOP1Q14137 746 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 SPANXN3Q5MJ09 141 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 SV2AQ7L0J3 742 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 FDXACB1Q9BRP7 624 aaPredicted RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 SENP6Q9GZR1 1112 aaPredicted RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 DDX43Q9NXZ2 648 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 DYRK3O43781 588 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 GP5P40197 560 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 C16orf46Q6P387 395 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 TMEM169Q96HH4 297 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 MTIF3Q9H2K0 278 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 DNPEPQ9ULA0 475 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 LRCH1Q9Y2L9 728 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 EGFRP00533 1210 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 TBL1YQ9BQ87 522 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 STN1Q9H668 368 aaKnown RBP18.35■□□□□ 0.53
COL5A3-201ENST00000264828 BTBD7Q9P203 1132 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 SHOC2Q9UQ13 582 aa18.35■□□□□ 0.53
COL5A3-201ENST00000264828 LAMTOR4Q0VGL1 99 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 GSTA3Q16772 222 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 AADACL2Q6P093 401 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 HERC6Q8IVU3 1022 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 ITFG1Q8TB96 612 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 PRMT6Q96LA8 375 aaPredicted RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 CCDC3Q9BQI4 270 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 USP20Q9Y2K6 914 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 SASH3O75995 380 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 KRT6AP02538 564 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 KRT6BP04259 564 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 TSPAN19P0C672 248 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 KRT6CP48668 564 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 NDST1P52848 882 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 ADARP55265 1226 aaKnown RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 CDH17Q12864 832 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 TRIM32Q13049 653 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 DGCR6Q14129 220 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 FAM126BQ8IXS8 530 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 HTR3CQ8WXA8 447 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 PXMP2Q9NR77 195 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 A8MX80 341 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 VAPBO95292 243 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 THP07101 528 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 CYP2A7P20853 494 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 PPP4CP60510 307 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 MARC1Q5VT66 337 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 SLC30A10Q6XR72 485 aa18.34■□□□□ 0.53
COL5A3-201ENST00000264828 RTL3Q8N8U3 475 aaKnown RBP18.34■□□□□ 0.53
COL5A3-201ENST00000264828 NARS2Q96I59 477 aaKnown RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms