RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 A0A0A0MRY4 1105 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 APOA4P06727 396 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PTPRAP18433 802 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 EIF4BP23588 611 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 EPHA3P29320 983 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ALDH1A3P47895 512 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 BCAT1P54687 386 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 YWHAZP63104 245 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 POU5F1Q01860 360 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 KLF10Q13118 480 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 UNC5BQ8IZJ1 945 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 BHLHE22Q8NFJ8 381 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 SPATA13Q96N96 652 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 RUBCNLQ9H714 662 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 NMRAL1Q9HBL8 299 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CLOCKO15516 846 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 MPOP05164 745 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ITGA2BP08514 1039 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CYP2B6P20813 491 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 OGDHQ02218 1023 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 BST2Q10589 180 aaKnown RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 KCNMB4Q86W47 210 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 PRR11Q96HE9 360 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ABI2Q9NYB9 513 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 ARHGAP28Q9P2N2 729 aa4.72□□□□□ -1.65
VPS13C-201ENST00000249837 TRPM3Q9HCF6 1732 aaPredicted RBP4.72□□□□□ -1.65
VPS13C-201ENST00000249837 CLDN5O00501 218 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 TSPAN3O60637 253 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 TMEM63AO94886 807 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 TSPAN8P19075 237 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 GRTP1Q5TC63 336 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 NEPROQ6NW34 567 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 TRMT10BQ6PF06 316 aaKnown RBP4.71□□□□□ -1.65
VPS13C-201ENST00000249837 CLVS1Q8IUQ0 354 aaPredicted RBP4.71□□□□□ -1.65
VPS13C-201ENST00000249837 BANPQ8N9N5 519 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 RMDN1Q96DB5 314 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 C17orf80Q9BSJ5 609 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 SPAG17Q6Q759 2223 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 COL18A1P39060 1754 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 ADM5C9JUS6 153 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 CYP2C8P10632 490 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 ADCK1Q86TW2 530 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 CHSY1Q86X52 802 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 EPB41L4BQ9H329 900 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 CAB39LQ9H9S4 337 aa4.71□□□□□ -1.65
VPS13C-201ENST00000249837 INPP4BO15327 924 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PGAM1P18669 254 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GRIA4P48058 902 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 RABGGTBP53611 331 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NRF1Q16656 503 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SH3PXD2AQ5TCZ1 1133 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 MOB2Q70IA6 237 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 FASTKD5Q7L8L6 764 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SPATA2LQ8IUW3 424 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TUBGCP3Q96CW5 907 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 B3GNT5Q9BYG0 378 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 WDR55Q9H6Y2 383 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 WDR41Q9HAD4 459 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PLLPQ9Y342 182 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ALS2Q96Q42 1657 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF536O15090 1300 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 FAM58BPP0C7Q3 252 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 VCLP18206 1134 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 HMOX2P30519 316 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GTF2H3Q13889 308 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 RALGPS1Q5JS13 557 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NAPEPLDQ6IQ20 393 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DPY19L2Q6NUT2 758 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TTC33Q6PID6 262 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ZNF555Q8NEP9 628 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GPRC5AQ8NFJ5 357 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 C18orf25Q96B23 403 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DSEQ9UL01 958 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 BRWD1Q9NSI6 2320 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NCF1BA6NI72 391 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NCF1CA8MVU1 366 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 MRASO14807 208 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SUPT7LO94864 414 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 NCF1P14598 390 aaPredicted RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 CHN2P52757 468 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 KCTD21Q4G0X4 260 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TMC7Q7Z402 723 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 IGDCC3Q8IVU1 814 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 SNX31Q8N9S9 440 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 REPS2Q8NFH8 660 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PIWIL2Q8TC59 973 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DNAJB3Q8WWF6 145 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 PRPF18Q99633 342 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 HNRNPRO43390 633 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GAS2O43903 313 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 B3GAT3O94766 335 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 GPX6P59796 221 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 LMO3Q8TAP4 145 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TBCBQ99426 244 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 ADAM7Q9H2U9 754 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 COL14A1Q05707 1796 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 DHX15O43143 795 aaKnown RBP4.71□□□□□ -1.66
VPS13C-201ENST00000249837 TBX10O75333 385 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 METTL18O95568 372 aa4.71□□□□□ -1.66
VPS13C-201ENST00000249837 LYNP07948 512 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms