RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 LPPQ93052 612 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 SLC9A7Q96T83 725 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 FERMT1Q9BQL6 677 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 TUBB6Q9BUF5 446 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 SHROOM3Q8TF72 1996 aa20.06■□□□□ 0.8
CDC42EP1-201ENST00000249014 MYADML2A6NDP7 307 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 FAM163BP0C2L3 166 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 NCAM1P13591 858 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 CALB2P22676 271 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 PTPN3P26045 913 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 CCNJLQ8IV13 435 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 NPWQ8N729 165 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 OR52K1Q8NGK4 314 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 RAB3IL1Q8TBN0 382 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 NTAN1Q96AB6 310 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 GSC2O15499 205 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 USP12O75317 370 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 FBXO21O94952 628 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 ITGA2BP08514 1039 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 ERVK-10P10266 1014 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 GNAT1P11488 350 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 SCAPQ12770 1279 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 RAB41Q5JT25 222 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 WASHC2DQ5SRD0 308 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 KYAT3Q6YP21 454 aaKnown RBP20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 N4BP2L2Q92802 583 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 FCRL3Q96P31 734 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 AGAP3Q96P47 875 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 RHOBTB2Q9BYZ6 727 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 FAM105AQ9NUU6 356 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 TAS2R1Q9NYW7 299 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 KLHL8Q9P2G9 620 aaPredicted RBP20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 FBXW11Q9UKB1 542 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 CDY2AQ9Y6F7 541 aa20.05■□□□□ 0.8
CDC42EP1-201ENST00000249014 C9IYK1 514 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 GNAZP19086 355 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 ELF1P32519 619 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 AQP5P55064 265 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 GJA9P57773 515 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 TPI1P60174 286 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 FASTKD1Q53R41 847 aaKnown RBP20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 N4BP2L1Q5TBK1 243 aaPredicted RBP20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 FAM91A1Q658Y4 838 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 BHLHA9Q7RTU4 235 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 KCNV2Q8TDN2 545 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 ACMSDQ8TDX5 336 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 NUDCD1Q96RS6 583 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 PAAF1Q9BRP4 392 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 YY1AP1Q9H869 796 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 CNGB3Q9NQW8 809 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 ST3GAL5Q9UNP4 418 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 HBS1LQ9Y450 684 aaKnown RBP20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 RPS6KL1Q9Y6S9 549 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 HHLA1C9JL84 531 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 GYG2O15488 501 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 TPBGLP0DKB5 382 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 GMPRP36959 345 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 LHX1P48742 406 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 AIF1P55008 147 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 MRPS6P82932 125 aaKnown RBP20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 STX3Q13277 289 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 DSTYKQ6XUX3 929 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 C4orf50Q6ZRC1 276 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 RASSF3Q86WH2 238 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 TREML1Q86YW5 311 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 CRLF3Q8IUI8 442 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 ZNF570Q96NI8 536 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 NAT9Q9BTE0 207 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 SLC38A7Q9NVC3 462 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 DDIT4Q9NX09 232 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 Q9Y3F1 56 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 SNX10Q9Y5X0 201 aa20.04■□□□□ 0.8
CDC42EP1-201ENST00000249014 CAPN14A8MX76 684 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 PRKCGP05129 697 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 POLBP06746 335 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 THP07101 528 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 ESRRAP11474 423 aaPredicted RBP20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 CCNG1P51959 295 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 RPL10AP62906 217 aaKnown RBP20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 PPM1JQ5JR12 505 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 STXBP5Q5T5C0 1151 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 MBLAC2Q68D91 279 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 TAF2Q6P1X5 1199 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 RPAINQ86UA6 219 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 EDEM1Q92611 657 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 CERS2Q96G23 380 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 ZFATQ9P243 1243 aa20.03■□□□□ 0.8
CDC42EP1-201ENST00000249014 ITM2AO43736 263 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 GLRA3O75311 464 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 LTFP02788 710 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 FGF3P11487 239 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 PPIDQ08752 370 aaKnown RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 NAB1Q13506 487 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 TMEM86AQ8N2M4 240 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 ENDOVQ8N8Q3 282 aaKnown RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 PGAP3Q96FM1 320 aaPredicted RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 THAP1Q9NVV9 213 aa20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 PPARGC1AQ9UBK2 798 aaKnown RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 RPL26L1Q9UNX3 145 aaKnown RBP20.02■□□□□ 0.8
CDC42EP1-201ENST00000249014 CASTOR2A6NHX0 329 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms