RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 KRR1Q13601 381 aaKnown RBP13.65□□□□□ -0.22
NEK4-201ENST00000233027 ERO1BQ86YB8 467 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SLC41A1Q8IVJ1 513 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 NMRAL1Q9HBL8 299 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 ANKRD6Q9Y2G4 727 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SEC22BO75396 215 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 RPS12P25398 132 aaKnown RBP13.65□□□□□ -0.22
NEK4-201ENST00000233027 FMO4P31512 558 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 C15orf59Q2T9L4 293 aaPredicted RBP13.65□□□□□ -0.22
NEK4-201ENST00000233027 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
NEK4-201ENST00000233027 TMC5Q6UXY8 1006 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 TBCDQ9BTW9 1192 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SAR1AQ9NR31 198 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 PCDHGC5Q9Y5F6 944 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 NWD1Q149M9 1564 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SPATA31A5Q5VU36 1347 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 SPATA31A7Q8IWB4 1347 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 H0YC42 278 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 NCAM2O15394 837 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 INSRRP14616 1297 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 PRMT9Q6P2P2 845 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 HDDC2Q7Z4H3 204 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 ASZ1Q8WWH4 475 aa13.65□□□□□ -0.22
NEK4-201ENST00000233027 LDLRP01130 860 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 KDELR1P24390 212 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 PPP3CAQ08209 521 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 METTL7BQ6UX53 244 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 POLNQ7Z5Q5 900 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SH3RF1Q7Z6J0 888 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 KATNAL2Q8IYT4 538 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SLC2A14Q8TDB8 520 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 OSCP1Q8WVF1 389 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 DNAJB3Q8WWF6 145 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ZFRQ96KR1 1074 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 DGCR6LQ9BY27 220 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 NOL6Q9H6R4 1146 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 A1CFQ9NQ94 594 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 A8MX80 341 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 NPY2RP49146 381 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 AUHQ13825 339 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 IL17AQ16552 155 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ZNF284Q2VY69 593 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 PGLYRP2Q96PD5 576 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 MIEF1Q9NQG6 463 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ATP6V1HQ9UI12 483 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 TRIM43BA6NCK2 446 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 PIGNO95427 931 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 CKMP06732 381 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 DARSP14868 501 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 BMP6P22004 513 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 UBAP2LQ14157 1087 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 WDR59Q6PJI9 974 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SENP6Q9GZR1 1112 aaPredicted RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 GANQ9H2C0 597 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SMIM22K7EJ46 135 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.234e-6■□□□□ 11.2
NEK4-201ENST00000233027 ATP4AP20648 1035 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 MARCKSL1P49006 195 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 NR2C2P49116 596 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 XRCC4Q13426 336 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 GRIK4Q16099 956 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ARMC4Q5T2S8 1044 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SDE2Q6IQ49 451 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 FAM45BPQ6NSW5 357 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 FLCNQ8NFG4 579 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ANKRD27Q96NW4 1050 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
NEK4-201ENST00000233027 STARD13Q9Y3M8 1113 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 BTN3A1O00481 513 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ALOX12P18054 663 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 TNFRSF8P28908 595 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 LRPAP1P30533 357 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 COX10Q12887 443 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 TAF5Q15542 800 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 INAQ16352 499 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 ATP13A4Q4VNC1 1196 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 GLT6D1Q7Z4J2 308 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 NACC2Q96BF6 587 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 VCPIP1Q96JH7 1222 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 PXDNQ92626 1479 aa13.64□□□□□ -0.23
NEK4-201ENST00000233027 SLIT1O75093 1534 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 A0A0B4J269 797 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 SNX3O60493 162 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 OR1E1P30953 314 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 HUNKP57058 714 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ARHGAP22Q7Z5H3 698 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 OOSP2Q86WS3 158 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ANKRD49Q8WVL7 239 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 CAMKK2Q96RR4 588 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 SYNCRIPO60506 623 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 PSMB4P28070 264 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 C21orf59P57076 290 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 SYTL1Q8IYJ3 562 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 ZCCHC7Q8N3Z6 543 aaKnown RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 SERAC1Q96JX3 654 aa13.63□□□□□ -0.23
NEK4-201ENST00000233027 SPRTNQ9H040 489 aaPredicted RBP13.63□□□□□ -0.23
NEK4-201ENST00000233027 SEMA4BQ9NPR2 832 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms