RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 OR56A4Q8NGH8 313 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ATXN2LQ8WWM7 1075 aaKnown RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 TBCBQ99426 244 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ATXN3LQ9H3M9 355 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 GBA2Q9HCG7 927 aaPredicted RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 HMGCRP04035 888 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 USP17L7P0C7H9 530 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 YBX3P16989 372 aaKnown RBP eCLIP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 PPP2R1BP30154 601 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 RAD23AP54725 363 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ZCCHC8Q6NZY4 707 aaKnown RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 HACD1B0YJ81 288 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 INPP4BO15327 924 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 YWHAQP27348 245 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 OTUD3Q5T2D3 398 aaPredicted RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 GJC2Q5T442 439 aaPredicted RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 NSMCE2Q96MF7 247 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 KLHL25Q9H0H3 589 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 FRMPD1Q5SYB0 1578 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 RBAK-RBAKDNI3L0D1 243 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ZNF862O60290 1169 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 TNNI3P19429 210 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 GSSP48637 474 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 COX10Q12887 443 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 SLC39A12Q504Y0 691 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 MILR1Q7Z6M3 343 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 SYTL1Q8IYJ3 562 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 TMEM159Q96B96 161 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ZBTB45Q96K62 511 aaPredicted RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 SERPINB11Q96P15 392 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 DUSP9Q99956 384 aaKnown RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 AHSPQ9NZD4 102 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 A0A087X1B8 175 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 DDX3XO00571 662 aaKnown RBP eCLIP18.22■□□□□ 0.519e-8■■■■■ 32.4
EXTL3-201ENST00000220562 ZNF7P17097 686 aaPredicted RBP18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ERVK-9P63128 1117 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 DGKKQ5KSL6 1271 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 PRKD2Q9BZL6 878 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 CDHR5Q9HBB8 845 aa18.22■□□□□ 0.51
EXTL3-201ENST00000220562 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 OR56A5P0C7T3 313 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 PRKAA2P54646 552 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 GCNT1Q02742 428 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 RD3Q7Z3Z2 195 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 EPHX4Q8IUS5 362 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 VCPIP1Q96JH7 1222 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 HDHD2Q9H0R4 259 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 SMPD4Q9NXE4 827 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 TAS2R13Q9NYV9 303 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 NWD1Q149M9 1564 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 FRMPD4Q14CM0 1322 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 A8MX80 341 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 TRIM13O60858 407 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 LPCAT2Q7L5N7 544 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ERLEC1Q96DZ1 483 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 MRPS26Q9BYN8 205 aaKnown RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 GEMIN8Q9NWZ8 242 aaKnown RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 SALL1Q9NSC2 1324 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 PSMD12O00232 456 aaPredicted RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 BTN3A1O00481 513 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 HS6ST1O60243 411 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 TMC7Q7Z402 723 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 CDK20Q8IZL9 346 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 POU5F2Q8N7G0 328 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ZNF75CPQ92670 426 aaPredicted RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 NACC2Q96BF6 587 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 SESN1Q9Y6P5 492 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 PAEPP09466 180 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 CACNA2D1P54289 1103 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 CSNK2BP67870 215 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ZSCAN18Q8TBC5 510 aaPredicted RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ZBTB10Q96DT7 871 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 TKTL2Q9H0I9 626 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ARMCX1Q9P291 453 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 KLHL3Q9UH77 587 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 ATP6V1HQ9UI12 483 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 MIPP30301 263 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 NUP62P37198 522 aaPredicted RBP18.21■□□□□ 0.51
EXTL3-201ENST00000220562 CBWD6Q4V339 395 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 NT5DC1Q5TFE4 455 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 HDDC2Q7Z4H3 204 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 OR6Y1Q8NGX8 325 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 OSCP1Q8WVF1 389 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 MIEF2Q96C03 454 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 DNAJC18Q9H819 358 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 LIMD1Q9UGP4 676 aa18.21■□□□□ 0.51
EXTL3-201ENST00000220562 TGFB3P10600 412 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 CLK2P49760 499 aaKnown RBP18.2■□□□□ 0.5
EXTL3-201ENST00000220562 SLC34A1Q06495 639 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 KIAA1683Q9H0B3 1180 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 CLTBP09497 229 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 KLRC2P26717 231 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 BDH2Q9BUT1 245 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 ARMC7Q9H6L4 198 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 XPNPEP3Q9NQH7 507 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 MROH7Q68CQ1 1323 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 MRASO14807 208 aa18.2■□□□□ 0.5
EXTL3-201ENST00000220562 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms