RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 KLHL20Q9Y2M5 609 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 CLDN5O00501 218 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 ALDH1A2O94788 518 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 KLHL18O94889 574 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 ZBTB11O95625 1053 aaPredicted RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 ZC3H12AQ5D1E8 599 aaKnown RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 SYT15Q9BQS2 421 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 MKL2Q9ULH7 1088 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 H3BN98 237 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 ZNF621Q6ZSS3 439 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 COG5Q9UP83 839 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 RARRES1P49788 294 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 PPP3CAQ08209 521 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 VPS72Q15906 364 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 IL27RAQ6UWB1 636 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 HDDC2Q7Z4H3 204 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 LPPQ93052 612 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 PPP1R14AQ96A00 147 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 PPIEQ9UNP9 301 aaKnown RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 MEGF6O75095 1541 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 A8MUI8 341 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 APOA4P06727 396 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 KCNJ2P63252 427 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 MGAT5Q09328 741 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 PRR23CQ6ZRP0 262 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 RELTQ969Z4 430 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 PARVBQ9HBI1 364 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 MRPL39Q9NYK5 338 aaKnown RBP13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 NCKIPSDQ9NZQ3 722 aa13.89□□□□□ -0.19
TGFBR3-201ENST00000212355 A0A0A6YYK5 440 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 H3BRB1 525 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 CRTAMO95727 393 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 VIL1P09327 827 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ETS2P15036 469 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 SNRPFP62306 86 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 OOSP2Q86WS3 158 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TNS4Q8IZW8 715 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ZDHHC15Q96MV8 337 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PDCD2LQ9BRP1 358 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TUT1Q9H6E5 874 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TM9SF1O15321 606 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 MTSS1O43312 755 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PRKAG1P54619 331 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 FCGRTP55899 365 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PPP4CP60510 307 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TRIM32Q13049 653 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PFKFB4Q16877 469 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 MARC1Q5VT66 337 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ZNF57Q68EA5 555 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 STYK1Q6J9G0 422 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 SH3BP5LQ7L8J4 393 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 DHFR2Q86XF0 187 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 FBXO39Q8N4B4 442 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 EXOC2Q96KP1 924 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TSEN34Q9BSV6 310 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PPCSQ9HAB8 311 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 LOC100506127A0A0U1RQW1 187 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 FAM58BPP0C7Q3 252 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TBX4P57082 545 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 APOPT1Q96IL0 206 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 GLIS2Q9BZE0 524 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 GDF3Q9NR23 364 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 BARX2Q9UMQ3 279 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PRKAB1Q9Y478 270 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PDHXO00330 501 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 LYPLA1O75608 230 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 NTRK1P04629 796 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 SLC2A3P11169 496 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 HPGDP15428 266 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 MSH3P20585 1137 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 CD151P48509 253 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 COX10Q12887 443 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 MAP1SQ66K74 1059 aaPredicted RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 AENQ8WTP8 325 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 C12orf65Q9H3J6 166 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 RRAGCQ9HB90 399 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 BLOC1S4Q9NUP1 217 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 CIDEBQ9UHD4 219 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 WNT7AO00755 349 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ADRB2P07550 413 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 NOS3P29474 1203 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 HNF4AP41235 474 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 MAXP61244 160 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 GRIK3Q13003 919 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 DPYSL3Q14195 570 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 KBTBD12Q3ZCT8 623 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 RBM43Q6ZSC3 357 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 TSHZ1Q6ZSZ6 1077 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 C12orf29Q8N999 325 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 NDRG1Q92597 394 aaKnown RBP13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 ZDHHC6Q9H6R6 413 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 PCDHA3Q9Y5H8 950 aa13.88□□□□□ -0.19
TGFBR3-201ENST00000212355 CES2O00748 559 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 RGS2P41220 211 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 ZNF484Q5JVG2 852 aa13.87□□□□□ -0.19
TGFBR3-201ENST00000212355 OVOS1Q6IE37 1185 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms