RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Armc12Q80X86 340 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Efcab14Q8BGQ6 484 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 CgasQ8C6L5 507 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 4921504E06RikQ8CET2 560 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Necab2Q91ZP9 389 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Cpxm2Q9D2L5 764 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 SyncQ9EPM5 470 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pcsk1nQ9QXV0 258 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pld1Q9Z280 1074 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Tubb1A2AQ07 451 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Lrrc6O88978 473 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Il2P04351 169 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 YwhagP61982 247 aaKnown RBP23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pgap2Q3TQR0 254 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Eif2b4Q61749 524 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Tas2r102Q7M717 329 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Tarsl2Q8BLY2 790 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Shc2Q8BMC3 573 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Lancl3Q8CD19 420 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Cd300ldQ8VCH2 221 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Q9D1F3 157 aa23.35■■□□□ 1.33
Scn1b-201ENSMUST00000098548 TrioQ0KL02 3102 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Nlgn4lB0F2B4 945 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ccnyl1D3YUJ3 367 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gfra2O08842 464 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Man2b1O09159 1013 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gm5571P01639 130 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Slc2a4P14142 509 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Mc4rP56450 332 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Arl4cP61208 192 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Timm13P62075 95 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Irf7P70434 457 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Gbp8Q2V6D6 525 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Afg1lQ3V384 480 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Taok1Q5F2E8 1001 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Baiap3Q80TT2 1134 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 AtripQ8BMG1 785 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Sh3rf3Q8C120 878 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Art3Q8R2G4 371 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 MgarpQ8VI64 283 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Barhl2Q8VIB5 384 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Pcdhb17Q91VD8 799 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 CoprsQ9CQ13 173 aa23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Noc2lQ9WV70 747 aaKnown RBP23.34■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Olfr663A0A1B0GSI9 319 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 5830411N06RikB3F5L4 1112 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Trim30cD3YVI9 513 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Vmn2r72D3Z4N8 856 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Nr2c1Q505F1 590 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Bdkrb1Q61125 334 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Haus3Q8QZX2 570 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Foxe1Q8R2I0 371 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Sec63Q8VHE0 760 aaKnown RBP23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Ddx1Q91VR5 740 aaKnown RBP23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Aipl1Q924K1 328 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Lysmd3Q99LE3 305 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Iqcf1Q9D9K8 182 aa23.33■■□□□ 1.33
Scn1b-201ENSMUST00000098548 Tcp10cE9Q046 482 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cd160O88875 185 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pim1P06803 397 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gnat1P20612 350 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gm14685Q52KH6 695 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Mef2dQ63943 514 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Kansl1Q80TG1 1036 aaKnown RBP23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Clec2eQ80XD9 204 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Mkl1Q8K4J6 964 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Pde6cQ91ZQ1 861 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ccdc124Q9D8X2 217 aaKnown RBP23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Vwa7Q9JHA8 891 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Magel2Q9QZ04 1284 aa23.32■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Siah3B2RWG3 268 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Atp2a2O55143 1044 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Aff1O88573 1216 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gabrr2P56476 465 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Emilin3P59900 758 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PhbP67778 272 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cct5P80316 541 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Srbd1Q497V5 1015 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ppp2r2aQ6P1F6 447 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Gtf3c4Q8BMQ2 817 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cacnb2Q8CC27 655 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Spdye4bQ8CDE8 236 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 AjubaQ91XC0 547 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 PpanQ91YU8 470 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Decr1Q9CQ62 335 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Map3k14Q9WUL6 942 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Slc2a5Q9WV38 501 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Igkv16-104A0A0B4J1I1 116 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 E230025N22RikG5E8S3 482 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Usp35M0QWN7 1009 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Hk1P17710 974 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Rpl22P67984 128 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cntn3Q07409 1028 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Nsun2Q1HFZ0 757 aaKnown RBP23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Ugt3a1Q3UP75 523 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Sema3cQ62181 751 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 OcrlQ6NVF0 900 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Cacna2d2Q6PHS9 1154 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Rnf187Q8BFX1 236 aa23.31■■□□□ 1.32
Scn1b-201ENSMUST00000098548 Orai2Q8BH10 250 aa23.31■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms