RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 PbsnO08976 174 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Ripk2P58801 539 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Kcna4Q61423 654 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Dgcr8Q9EQM6 773 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 TriqkB2B9E1 86 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Xpnpep3B7ZMP1 506 aaKnown RBP18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Gm281D3Z1Y0 860 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Slc27a6E9Q9W4 619 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Btg4O70552 250 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Brcc3P46737 291 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Cct7P80313 544 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Aqp1Q02013 269 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Podnl1Q6P3Y9 559 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Olfr474Q8VFC9 310 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 RecqlQ9Z129 648 aa18.77■□□□□ 0.6
Scaf11-201ENSMUST00000047835 Olfr1123A2AT85 323 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Barx2O08686 283 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Hspa9P38647 679 aaKnown RBP18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Gabpb1Q00420 383 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Fads2p1Q0VAX3 487 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Pdss1Q33DR2 409 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Gpsm1Q6IR34 673 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 SgtaQ8BJU0 315 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Actr8Q8R2S9 624 aaKnown RBP18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 HpgdQ8VCC1 269 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Txndc12Q9CQU0 170 aa18.77■□□□□ 0.59
Scaf11-201ENSMUST00000047835 PcnaP17918 261 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Arnt2Q61324 712 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Bcl2l1Q64373 233 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Parp9Q8CAS9 866 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Stx5Q8K1E0 355 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Cables1Q9ESJ1 568 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Tcirg1Q9JHF5 834 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Elf4Q9Z2U4 655 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Sf3b1Q99NB9 1304 aaKnown RBP18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Pcdh7A0A0A6YY83 1255 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 1700064H15RikD3Z4D4 81 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Tada2bD3Z4Z0 420 aaKnown RBP18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Gm8257E9Q8R3 264 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Ctbp1O88712 441 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Cops7bQ8BV13 264 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Thop1Q8C1A5 687 aaKnown RBP18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Hspa12bQ9CZJ2 685 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 1700018B08RikQ9DA83 213 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Poc5Q9DBS8 558 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 4933424G06RikA0A140LIP3 267 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 LgmnO89017 435 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 AcadmP45952 421 aaKnown RBP18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Fam126aQ6P9N1 521 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Adcy4Q91WF3 1077 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 TheglQ9DA15 459 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Heg1E9Q7X6 1337 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Sdccag3A2AIW0 432 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Anxa4P97429 319 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Prdx5P99029 210 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Adcy6Q01341 1165 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 ClyblQ8R4N0 338 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Med21Q9CQ39 144 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Cdk14O35495 469 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Ctnnb1Q02248 781 aaKnown RBP18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Rufy4Q3TYX8 563 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Shroom1Q5SX79 823 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Zrsr1Q64707 428 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Tubgcp4Q9D4F8 667 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Olfr706Q9EPF8 316 aa18.76■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Gm10639E9Q6L7 222 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Angpt2O35608 496 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Gsta2P10648 222 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 RalgdsQ03385 852 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Nt5dc3Q3UHB1 546 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Tmc8Q7TN58 722 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Fbxo30Q8BJL1 746 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Slf1Q8R3P9 1054 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Olfr348Q8VGK3 313 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 RpainQ9CWY9 219 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Rnf25Q9QZR0 456 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Olfr1023A2ASU6 311 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Skint11A7XV14 364 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 UncxO08934 530 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Rpl7aP12970 266 aaKnown RBP18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Scp2P32020 547 aaKnown RBP18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Cpa1Q7TPZ8 419 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Ccdc85bQ6PDY0 202 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 ZfatQ7TS63 1237 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Rasal3Q8C2K5 1041 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Syt15Q8C6N3 418 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 HnrnplQ8R081 586 aaKnown RBP18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 NclnQ8VCM8 563 aaKnown RBP18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Astn1Q61137 1302 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Ric1Q69ZJ7 1422 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Chd4Q6PDQ2 1915 aaKnown RBP18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 RasefQ5RI75 627 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Rxfp1Q6R6I7 758 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Enpp4Q8BTJ4 456 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Ttc39bQ8BYY4 617 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Lrp8Q924X6 996 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Smim11aQ99J19 55 aa18.75■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Trim12cD3Z3L3 497 aa18.74■□□□□ 0.59
Scaf11-201ENSMUST00000047835 AdssP46664 456 aa18.74■□□□□ 0.59
Scaf11-201ENSMUST00000047835 Mis18bp1Q80WQ8 998 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms