RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Vangl2Q91ZD4 521 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Lyrm1Q9CQB7 122 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Sesn3Q9CYP7 492 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Zfp655Q9CZP3 541 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tcirg1Q9JHF5 834 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Prl2a1Q9JHK0 228 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rnf19bA2A7Q9 732 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Znf711A2ANX9 761 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 XntrpcF8VQM8 1264 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Capn6O35646 641 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cd44P15379 778 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Aldh1a1P24549 501 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 1700061G19RikQ08EE8 705 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Shcbp1lQ3TTP0 639 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Fam83fQ3UKU4 495 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gm5431Q5NCB3 844 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pxylp1Q8BHA9 480 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ifi205aQ8CGE8 404 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Eif3lQ8QZY1 564 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Agr3Q8R3W7 165 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Utp6Q8VCY6 597 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pcdh18Q8VHR0 1134 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Mrpl1Q99N96 336 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 4930550L24RikQ99PA7 320 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tmem86aQ9D8N3 241 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Trpc2Q9R244 1172 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tmem115Q9WUH1 350 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 AadatQ9WVM8 425 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rps6kb2Q9Z1M4 485 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ttll9A2APC3 461 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 S100zB9EJL3 99 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 ClockO08785 855 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Rgs2O08849 211 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Angpt2O35608 496 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 UgcgO88693 394 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Fcer2P20693 331 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Epha3P29319 983 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 CartptP56388 129 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 HmgcrQ01237 887 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ppm1jQ149T7 507 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Eif1adQ3THJ3 170 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pdap1Q3UHX2 181 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 9930111J21Rik1Q5SVP0 844 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tas2r131Q7M708 310 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Skida1Q80YR3 822 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Teddm1aQ810U2 305 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Acvr1cQ8K348 493 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Depdc7Q91WS7 511 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tas1r3Q925D8 858 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pkp2Q9CQ73 795 aaKnown RBP10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 MkksQ9JI70 570 aa10.14□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Nlrp1bA1Z198 1177 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Olfr1123A2AT85 323 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cdh18E9Q9Q6 790 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Has3O08650 554 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 DcxO88809 366 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 PrkchP23298 683 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Muc3aQ3U5A2 218 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Bcap31Q61335 245 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Adgre1Q61549 931 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ugt1a1Q63886 535 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gstt1Q64471 240 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 MregQ6NVG5 214 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 C6.1alQ7M757 291 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pcsk9Q80W65 694 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Camk1dQ8BW96 385 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Slc47a1Q8K0H1 567 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Spag16Q8K450 639 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Zdhhc3Q8R173 299 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Epn3Q91W69 636 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gprc5bQ923Z0 410 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tlr9Q9EQU3 1032 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ap3m1Q9JKC8 418 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cdc42ep5Q9Z0X0 150 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Fam71aB7XG49 585 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Dthd1E9PZX1 795 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Zfp358E9Q8M1 571 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gm10477F6SW83 55 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tnk2O54967 1055 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Gsdmc2Q2KHK6 480 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Prmt6Q6NZB1 378 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 TdrkhQ80VL1 560 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Enpp4Q8BTJ4 456 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Coq6Q8R1S0 476 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cd300ldQ8VCH2 221 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tmco1Q921L3 188 aaKnown RBP10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Lztr1Q9CQ33 837 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Q9D9D9 101 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Ifi30Q9ESY9 248 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Mta2Q9R190 668 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 NfkbiaQ9Z1E3 314 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Pgap3A2A559 320 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 PotegA5H0M4 473 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cyp2b9P12790 491 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Prim2P33610 505 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Olfr23Q7TRX4 325 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Slc8a2Q8K596 921 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Cog2Q921L5 731 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Tnfaip8Q921Z5 198 aa10.13□□□□□ -0.79
Ldlr-201ENSMUST00000034713 Trim33Q99PP7 1142 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 22.4 ms