RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Pcdhb18Q91Y02 792 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tsga13Q9DA17 273 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 S1pr4Q9Z0L1 386 aa18.25■□□□□ 0.51
Ptpra-201ENSMUST00000028769 XntrpcF8VQM8 1264 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fam167bP17257 162 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ndst1Q3UHN9 882 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 ProcrQ64695 242 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Coq6Q8R1S0 476 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 StambpQ9CQ26 424 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ap2b1Q9DBG3 937 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Wfdc1Q9ESH5 211 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Atp11cQ9QZW0 1129 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rbck1Q9WUB0 508 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 LmnaP48678 665 aaKnown RBP18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Klra8Q60682 266 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Arrdc3Q7TPQ9 414 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tbc1d13Q8R3D1 400 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pcdha1Q91Y21 948 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Psip1Q99JF8 528 aaKnown RBP18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Clic3Q9D7P7 237 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Eif4e3Q9DBB5 207 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Nme7Q9QXL8 395 aa18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Nup205A0A0J9YUD5 2061 aaKnown RBP18.24■□□□□ 0.51
Ptpra-201ENSMUST00000028769 A630010A05RikA9C473 232 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gm8444F6XS56 118 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 E230025N22RikG5E8S3 482 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Zfy2P20662 777 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pex2P55098 305 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cd36Q08857 472 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Grid2ipQ0QWG9 1203 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tmem45aQ60774 273 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mtmr10Q7TPM9 771 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Grk2Q99MK8 689 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cacna1cQ01815 2139 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Smok3cA0A087WSF2 504 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dsg3O35902 993 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mc4rP56450 332 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Emilin3P59900 758 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gpsm3Q3U1Z5 159 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mettl17Q3U2U7 461 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 CochQ62507 552 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 ScapQ6GQT6 1276 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fbxo41Q6NS60 873 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tbx10Q810F8 385 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Aste1Q8BIR2 672 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Anapc5Q8BTZ4 740 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 AslQ91YI0 464 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Taf11Q99JX1 211 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Tpd52l2Q9CYZ2 220 aaKnown RBP18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Actrt2Q9D9L5 377 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Vmn2r121A2BE32 847 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Osbpl8B9EJ86 889 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Olfr600E9PUN7 314 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ercc2O08811 760 aaKnown RBP18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Eno3P21550 434 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Nab1Q61122 486 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dennd2cQ6P9P8 914 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Jade1Q6ZPI0 834 aaKnown RBP18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Sec24bQ80ZX0 1251 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Pcdhb2Q91Y00 799 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Plin3Q9DBG5 437 aa18.23■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Gjd2O54851 321 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ptger1P35375 405 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 KizQ3UXL4 695 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ecm1Q61508 559 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 4930503B20RikQ80ZP0 234 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 FsbpQ8BKE5 299 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 CntrobQ8CB62 887 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ero1bQ8R2E9 467 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rps6kl1Q8R2S1 544 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 CygbQ9CX80 190 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 QkiQ9QYS9 341 aaKnown RBP18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Znf683I7HJS4 458 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rdh7O88451 316 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 JchainP01592 159 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Alas2P08680 587 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ca8P28651 291 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Aqp4P55088 323 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Dsc2P55292 902 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Akap7Q7TN79 314 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Olfr533Q7TRT7 320 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ckap2lQ7TS74 745 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cdkn2aipQ8BI72 563 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Wdr59Q8C0M0 992 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Slco4a1Q8K078 723 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ndufa10Q99LC3 355 aaKnown RBP18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Ing2Q9ESK4 281 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cntnap5aQ0V8T9 1304 aa18.22■□□□□ 0.51
Ptpra-201ENSMUST00000028769 AmacrO09174 381 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 ChrngP04760 519 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cd2P08920 344 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mea1Q64327 174 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Rad54bQ6PFE3 886 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fbxw21Q8BI38 468 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Fnbp1lQ8K012 605 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Mtss1Q8R1S4 759 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Clptm1Q8VBZ3 664 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Vangl2Q91ZD4 521 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Cog2Q921L5 731 aa18.21■□□□□ 0.51
Ptpra-201ENSMUST00000028769 Map3k14Q9WUL6 942 aa18.21■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms