RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 MEIS1O00470 390 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 GAS2O43903 313 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 RHOBTB1O94844 696 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 DLDP09622 509 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 ALDH4A1P30038 563 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 YAP1P46937 504 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 RCAN1P53805 252 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 RAB39AQ14964 217 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 ARMC4Q5T2S8 1044 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 BROXQ5VW32 411 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 HMBOX1Q6NT76 420 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 ATG9AQ7Z3C6 839 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 RHOT1Q8IXI2 618 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 TDRD5Q8NAT2 981 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 SNX19Q92543 992 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 VCPIP1Q96JH7 1222 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 PRRG3Q9BZD7 231 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 MKRN2Q9H000 416 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 RPF2Q9H7B2 306 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 KCNN3Q9UGI6 736 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 XPO7Q9UIA9 1087 aaKnown RBP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 BAG5Q9UL15 447 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 UGT2A1Q9Y4X1 527 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 NUMBLQ9Y6R0 609 aa7.57□□□□□ -1.2
PDE6A-205ENST00000617647 SF3B1O75533 1304 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDE6A-205ENST00000617647 USP17L12C9JPN9 530 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 USP17L21D6R901 530 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MEN1O00255 615 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TFECO14948 347 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 AP1G1O43747 822 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NMT2O60551 498 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ATP5BP06576 529 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CHRNB2P17787 502 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ATF6P18850 670 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 RFX5P48382 616 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MFAP3P55082 362 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 RAB14P61106 215 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 OLR1P78380 273 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CDKL1Q00532 357 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SCRN3Q0VDG4 424 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 DPYSQ14117 519 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TBCELQ5QJ74 424 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CAMK1DQ8IU85 385 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CPNE9Q8IYJ1 553 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PLBD2Q8NHP8 589 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF420Q8TAQ5 688 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PIWIL2Q8TC59 973 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 BRSK1Q8TDC3 778 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ASB12Q8WXK4 309 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 LRTOMTQ8WZ04 291 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 DHRS9Q9BPW9 319 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SEZ6LQ9BYH1 1024 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF395Q9H8N7 513 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 WDR41Q9HAD4 459 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ITM2CQ9NQX7 267 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 FBXO28Q9NVF7 368 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MTRRQ9UBK8 725 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHA6Q9UN73 950 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TBX22Q9Y458 520 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHA8Q9Y5H6 950 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 LYPLA1O75608 230 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ALX3O95076 343 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 KRT19P08727 400 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PTPN2P17706 415 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ACAT1P24752 427 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CCNCP24863 283 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 OPRL1P41146 370 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SLC1A6P48664 564 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 INPP1P49441 399 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NFATC3Q12968 1075 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TOP3AQ13472 1001 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 FASTKD1Q53R41 847 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF544Q6NX49 715 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 IFNL1Q8IU54 200 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC60Q8IWA6 550 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SFRP1Q8N474 314 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 OR5H6Q8NGV6 325 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NKX2-3Q8TAU0 364 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 RAB2BQ8WUD1 216 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 HSPH1Q92598 858 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 ATP6V1E2Q96A05 226 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TTYH2Q9BSA4 534 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NDFIP2Q9NV92 336 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC59Q9P031 241 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SRP68Q9UHB9 627 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PSME2Q9UL46 239 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 MRPS7Q9Y2R9 242 aaKnown RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PCDHA3Q9Y5H8 950 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 NR2E3Q9Y5X4 410 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SLC30A1Q9Y6M5 507 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CEP170BQ9Y4F5 1589 aaPredicted RBP7.56□□□□□ -1.2
PDE6A-205ENST00000617647 PTPRUQ92729 1446 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 A0A1B0GTW7 788 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC182A6NF36 153 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 BTN3A3O00478 584 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 TOMM70O94826 608 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 WDR47O94967 919 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 SERPINB2P05120 415 aa7.56□□□□□ -1.2
PDE6A-205ENST00000617647 UGT2B4P06133 528 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms