RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 MSANTD2Q6P1R3 559 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 WDR59Q6PJI9 974 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LAYNQ6UX15 382 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CACNA2D4Q7Z3S7 1137 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TMEFF1Q8IYR6 380 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TTC39CQ8N584 583 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TMA16Q96EY4 203 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LMLNQ96KR4 655 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 AGPAT1Q99943 283 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 EHD2Q9NZN4 543 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SERGEFQ9UGK8 458 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MBD1Q9UIS9 605 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MFHAS1Q9Y4C4 1052 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 GABRG2P18507 467 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 NDUFV2P19404 249 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ABCB4P21439 1286 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 STAT1P42224 750 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 HARS2P49590 506 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 SF3A2Q15428 464 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 KCTD19Q17RG1 926 aaPredicted RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 LINGO4Q6UY18 593 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MON1BQ7L1V2 547 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 FAM124AQ86V42 546 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 RXFP2Q8WXD0 754 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 NELL1Q92832 810 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 NPY6RQ99463 290 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 CHP1Q99653 195 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 OSBPL6Q9BZF3 934 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 COMMD8Q9NX08 183 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 TBC1D14Q9P2M4 693 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 ADAMTS1Q9UHI8 967 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 FBXO10Q9UK96 956 aa5.91□□□□□ -1.46
CPNE3-208ENST00000614678 MRPS17Q9Y2R5 130 aaKnown RBP5.91□□□□□ -1.46
CPNE3-208ENST00000614678 DOCK4Q8N1I0 1966 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 A0A0U1RQJ8 604 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 TTC34A8MYJ7 566 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 SNAP91O60641 907 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 DRD1P21728 446 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 PSEN1P49768 467 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 HDAC4P56524 1084 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CA9Q16790 459 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CLEC16AQ2KHT3 1053 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 SLC26A9Q7LBE3 791 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 FAM217AQ8IXS0 508 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 TMEM35BQ8NCS4 154 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 ATRIPQ8WXE1 791 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 RNF34Q969K3 372 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 MCEEQ96PE7 176 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 LSM7Q9UK45 103 aaKnown RBP5.9□□□□□ -1.46
CPNE3-208ENST00000614678 STRIP2Q9ULQ0 834 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 TLR6Q9Y2C9 796 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 MUC22E2RYF6 1773 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CEP192Q8TEP8 1941 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 A0A087X0T9 212 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 GJB3O75712 270 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 APODP05090 189 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 FAM228BP0C875 321 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 TACR2P21452 398 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 GRIA2P42262 883 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 GABRB2P47870 512 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 AUHQ13825 339 aaKnown RBP5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CXorf57Q6NSI4 855 aaKnown RBP5.9□□□□□ -1.46
CPNE3-208ENST00000614678 LRSAM1Q6UWE0 723 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CHSY1Q86X52 802 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 STK32AQ8WU08 396 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 NKD2Q969F2 451 aaPredicted RBP5.9□□□□□ -1.46
CPNE3-208ENST00000614678 ARHGEF26Q96DR7 871 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 PEBP4Q96S96 227 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 NELL2Q99435 816 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 HINFPQ9BQA5 517 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 ARHGAP20Q9P2F6 1191 aa5.9□□□□□ -1.46
CPNE3-208ENST00000614678 CACNA1AO00555 2505 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 SOBPA7XYQ1 873 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 BNIP3LO60238 219 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 GKP32189 559 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 CSKP41240 450 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 MATKP42679 507 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 CT47A1Q5JQC4 288 aaPredicted RBP5.9□□□□□ -1.47
CPNE3-208ENST00000614678 GRAMD4Q6IC98 578 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 CHST9Q7L1S5 443 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 SYT13Q7L8C5 426 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 ZNF683Q8IZ20 524 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 IRGQQ8WZA9 623 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 KLC2Q9H0B6 622 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 ADAM22Q9P0K1 906 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 MARK1Q9P0L2 795 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 MYO1AQ9UBC5 1043 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 SMG5Q9UPR3 1016 aaKnown RBP5.9□□□□□ -1.47
CPNE3-208ENST00000614678 NEU3Q9UQ49 428 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 STON1Q9Y6Q2 735 aa5.9□□□□□ -1.47
CPNE3-208ENST00000614678 CKAP5Q14008 2032 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 A0A0A0MRY4 1105 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 NCAM2O15394 837 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 SMAD6O43541 496 aaKnown RBP5.89□□□□□ -1.47
CPNE3-208ENST00000614678 LILRB5O75023 590 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 HOXB2P14652 356 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 PDGFRAP16234 1089 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 GBP1P32455 592 aa5.89□□□□□ -1.47
CPNE3-208ENST00000614678 CCR3P51677 355 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms