RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 E7ESA3 106 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 VAPBO95292 243 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 APOA4P06727 396 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 MYL4P12829 197 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CPB1P15086 417 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 HDAC4P56524 1084 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PSTKQ8IV42 348 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 POU5F2Q8N7G0 328 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 UBR7Q8N806 425 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CALML6Q8TD86 181 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 DENND1AQ8TEH3 1009 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 EXT2Q93063 718 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PPWD1Q96BP3 646 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 MAML3Q96JK9 1138 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CATSPERBQ9H7T0 1116 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SP110Q9HB58 689 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 DMAP1Q9NPF5 467 aaPredicted RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 ARHGEF3Q9NR81 526 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ZNF180Q9UJW8 692 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 C4AP0C0L4 1744 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PSMD3O43242 534 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 DAB1O75553 588 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TGDSO95455 350 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 MMP3P08254 477 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 NFKB1P19838 968 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 GLRBP48167 497 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ZNF235Q14590 738 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 RGS9BPQ6ZS82 235 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TRIM67Q6ZTA4 783 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PPHLN1Q8NEY8 458 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 SLC9A7Q96T83 725 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SYT17Q9BSW7 474 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 COLEC11Q9BWP8 271 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 RNF39Q9H2S5 420 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 DPEP3Q9H4B8 488 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 RBM22Q9NW64 420 aaKnown RBP eCLIP6.54□□□□□ -1.36
SNX13-213ENST00000611725 SORCS3Q9UPU3 1222 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 AAR2Q9Y312 384 aaKnown RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 ABLIM1O14639 778 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TYROBPO43914 113 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SMIM24O75264 130 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ERVK-10P10266 1014 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 STMN1P16949 149 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SCNN1AP37088 669 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CDK7P50613 346 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 RAB44Q7Z6P3 723 aaPredicted RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 CMC1Q7Z7K0 106 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 PYROXD2Q8N2H3 581 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 LZTR1Q8N653 840 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 SMARCD1Q96GM5 515 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 ARHGEF38Q9NXL2 777 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 TAS2R1Q9NYW7 299 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.54□□□□□ -1.36
SNX13-213ENST00000611725 IPPQ9Y573 584 aa6.54□□□□□ -1.36
SNX13-213ENST00000611725 AIM2O14862 343 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 MFSD11O43934 449 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 FAM155BO75949 473 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CSH1P0DML2 217 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CSH2P0DML3 217 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 SLC2A3P11169 496 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 LMO2P25791 158 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 GRIA1P42261 906 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CRYBB1P53674 252 aaPredicted RBP6.53□□□□□ -1.36
SNX13-213ENST00000611725 ATXN1P54253 815 aaKnown RBP6.53□□□□□ -1.36
SNX13-213ENST00000611725 NAGLUP54802 743 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 GEMP55040 296 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 NAB1Q13506 487 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 ANO4Q32M45 955 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 TMEM63BQ5T3F8 832 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 LRGUKQ96M69 825 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 GLT1D1Q96MS3 346 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 ZFYVE28Q9HCC9 887 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CYLDQ9NQC7 956 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 IARS2Q9NSE4 1012 aaKnown RBP6.53□□□□□ -1.36
SNX13-213ENST00000611725 ARHGAP26Q9UNA1 814 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 COL22A1Q8NFW1 1626 aaPredicted RBP6.53□□□□□ -1.36
SNX13-213ENST00000611725 E9PBE3 544 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 GOLGA8TH3BQL2 631 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 KLHL41O60662 606 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 BPGMP07738 259 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 FKBP1BP68106 108 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 SCUBE1Q8IWY4 988 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 ARFGAP1Q8N6T3 406 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CCDC185Q8N715 623 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 QKIQ96PU8 341 aaKnown RBP eCLIP6.53□□□□□ -1.361e-6■■■■□ 26.7
SNX13-213ENST00000611725 YIPF3Q9GZM5 350 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 TKTL2Q9H0I9 626 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 TCF7L2Q9NQB0 619 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 TREHO43280 583 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 PLIN3O60664 434 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 GCATO75600 419 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 RPLP2P05387 115 aaKnown RBP6.53□□□□□ -1.36
SNX13-213ENST00000611725 USP17L7P0C7H9 530 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 ACADSP16219 412 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 CCR1P32246 355 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 POU6F1Q14863 301 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 LRRC36Q1X8D7 754 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 TTC7BQ86TV6 843 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 RNF135Q8IUD6 432 aa6.53□□□□□ -1.36
SNX13-213ENST00000611725 RAB3IL1Q8TBN0 382 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms