RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SLC9A4Q6AI14 798 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 KRT74Q7RTS7 529 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 FAM228AQ86W67 206 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TARS2Q9BW92 718 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 NUAK2Q9H093 628 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CHMP1AQ9HD42 196 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 NMRK2Q9NPI5 230 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 A0A0U1RQJ8 604 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CD44P16070 742 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PON1P27169 355 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 HOXD10P28358 340 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 MPP3Q13368 585 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 BLMHQ13867 455 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 KHDRBS2Q5VWX1 349 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PTAR1Q7Z6K3 402 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TSEN34Q9BSV6 310 aaKnown RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 C9orf16Q9BUW7 83 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 PNPLA3Q9NST1 481 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 UBXN8O00124 270 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 MTSS1O43312 755 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CYP4F2P78329 520 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 CYP4F3Q08477 520 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 MTFR1Q15390 333 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 TFDP3Q5H9I0 405 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 N4BP2L1Q5TBK1 243 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SOAT2O75908 522 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 ITGB3P05106 788 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 RAB27AP51159 221 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 EFCAB12Q6NXP0 572 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SVOPQ8N4V2 548 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 AASDHPPTQ9NRN7 309 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SLC37A4O43826 429 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 RPA3P35244 121 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-216ENST00000602557 SP8Q8IXZ3 490 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 ASB12Q8WXK4 309 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 AGPAT3Q9NRZ7 376 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 FBXO28Q9NVF7 368 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 DDIT4Q9NX09 232 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 NEXMIFQ5QGS0 1516 aa8.89□□□□□ -0.99
CSMD1-216ENST00000602557 USP42Q9H9J4 1324 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 MGAT5BQ3V5L5 792 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FAM98BQ52LJ0 330 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TTC27Q6P3X3 843 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 KIAA0408Q6ZU52 694 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SMIM5Q71RC9 77 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CHMP1BQ7LBR1 199 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SLC44A2Q8IWA5 706 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CUEDC1Q9NWM3 386 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 DCXO43602 365 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 AGAP9Q5VTM2 703 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 DENND5AQ6IQ26 1287 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ZFP1Q6P2D0 407 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 OR8H1Q8NGG4 311 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 PREBQ9HCU5 417 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 COMMD8Q9NX08 183 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TUBE1Q9UJT0 475 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 A0A087X0T9 212 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 F8W810 466 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 GH1P01241 217 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FAM228BP0C875 321 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TYSND1Q2T9J0 566 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 PTPN20Q4JDL3 420 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 NAPEPLDQ6IQ20 393 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 DENND1BQ6P3S1 775 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ZBTB8BQ8NAP8 495 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TADA1Q96BN2 335 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 WDR12Q9GZL7 423 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SPATA31A3Q5VYP0 1347 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CACNA1CQ13936 2221 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 A0A0G2JPF8 293 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 HNRNPCL3B7ZW38 293 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 NPM3O75607 178 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 HNRNPCL4P0DMR1 293 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FDX1P10109 184 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CYP11B1P15538 503 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CCNA2P20248 432 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 GRSF1Q12849 480 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TBC1D16Q8TBP0 767 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TCP10LQ8TDR4 215 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 DPP3Q9NY33 737 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 CRB1P82279 1406 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 RAP1GAPP47736 663 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TUBA3CQ13748 450 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 RNASE12Q5GAN4 147 aaKnown RBP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 LRRC17Q8N6Y2 441 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 OSCP1Q8WVF1 389 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 VMP1Q96GC9 406 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 RNF145Q96MT1 663 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 UCKL1Q9NWZ5 548 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 TBX3O15119 743 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 EFR3AQ14156 821 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 PRAMEF18Q5VWM3 479 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 ULK2Q8IYT8 1036 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSMD1-216ENST00000602557 KLK14Q9P0G3 267 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 NCOA3Q9Y6Q9 1424 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 GNG14A0A1W2PPG7 69 aa8.88□□□□□ -0.99
CSMD1-216ENST00000602557 NR3C2P08235 984 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms