RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 UBA3Q8TBC4 463 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 RNF139Q8WU17 664 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 IRGQQ8WZA9 623 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TFAP2BQ92481 460 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 PRCCQ92733 491 aaPredicted RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 GATA6Q92908 595 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 AZIN2Q96A70 460 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TMA16Q96EY4 203 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 SIPA1Q96FS4 1042 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TOE1Q96GM8 510 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 CEP63Q96MT8 703 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 GBP4Q96PP9 640 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 NUP58Q9BVL2 599 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 GTPBP2Q9BX10 602 aaKnown RBP10.85□□□□□ -0.67
VPS4B-207ENST00000591519 PCED1AQ9H1Q7 454 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 TMEM245Q9H330 911 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 SFMBT1Q9UHJ3 866 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 NEUROG3Q9Y4Z2 214 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 CKAP5Q14008 2032 aa10.85□□□□□ -0.67
VPS4B-207ENST00000591519 A0A1B0GTW7 788 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 SPAARA0A1B0GVQ0 90 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 TRIM49BA6NDI0 452 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 RNF225M0QZC1 329 aaPredicted RBP10.84□□□□□ -0.67
VPS4B-207ENST00000591519 P4HA2O15460 535 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 AVPP01185 164 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 IGLV3-27P01718 113 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 CD19P15391 556 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 SPINK2P20155 84 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 PRKCHP24723 683 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 MAOBP27338 520 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 HLA-FP30511 346 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 RDXP35241 583 aaKnown RBP10.84□□□□□ -0.67
VPS4B-207ENST00000591519 PPP1R2P41236 205 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 RPL34P49207 117 aaKnown RBP10.84□□□□□ -0.67
VPS4B-207ENST00000591519 FMO5P49326 533 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 DAOAP59103 153 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 RING1Q06587 406 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 ADIGQ0VDE8 80 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 PMF1Q6P1K2 205 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 ADIPOR2Q86V24 386 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 C1orf216Q8TAB5 229 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 WFIKKN2Q8TEU8 576 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 SORCS1Q8WY21 1168 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 EDEM1Q92611 657 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 ERLEC1Q96DZ1 483 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 HSFY1Q96LI6 401 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 ZSWIM1Q9BR11 485 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 LMBRD1Q9NUN5 540 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 GMPR2Q9P2T1 348 aaKnown RBP10.84□□□□□ -0.67
VPS4B-207ENST00000591519 PLA2G4CQ9UP65 541 aa10.84□□□□□ -0.67
VPS4B-207ENST00000591519 FRYQ5TBA9 3013 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 CHD6Q8TD26 2715 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 TTC24A2A3L6 582 aaPredicted RBP10.83□□□□□ -0.68
VPS4B-207ENST00000591519 PSMA7O14818 248 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 IRAK2O43187 625 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 EPHX1P07099 455 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 FAM193AP78312 1265 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 SIM1P81133 766 aaPredicted RBP10.83□□□□□ -0.68
VPS4B-207ENST00000591519 STILQ15468 1287 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 ZNF423Q2M1K9 1284 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 PIK3R6Q5UE93 754 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 TMEM270Q6UE05 265 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 SERPINA13PQ6UXR4 307 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 DBX2Q6ZNG2 339 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 GLRX5Q86SX6 157 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 UNC45BQ8IWX7 931 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 SIX6OS1Q8N1H7 587 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 OR2I1PQ8NGU4 316 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 OR2T3Q8NH03 318 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 GPR174Q9BXC1 333 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 CIPCQ9C0C6 399 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 FBRSQ9HAH7 460 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 ZMIZ1Q9ULJ6 1067 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.83□□□□□ -0.68
VPS4B-207ENST00000591519 CNTN6Q9UQ52 1028 aa10.83□□□□□ -0.68
VPS4B-207ENST00000591519 ZFHX4Q86UP3 3567 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 CFAP47Q6ZTR5 3102 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 GOLGA6L22H0YM25 854 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 BCAT2O15382 392 aaPredicted RBP10.82□□□□□ -0.68
VPS4B-207ENST00000591519 HYAL3O43820 417 aaPredicted RBP10.82□□□□□ -0.68
VPS4B-207ENST00000591519 SH3BP5O60239 455 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 TSPAN3O60637 253 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 FBXO21O94952 628 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 FYNP06241 537 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 DLDP09622 509 aaKnown RBP10.82□□□□□ -0.68
VPS4B-207ENST00000591519 ZNF883P0CG24 379 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 ACADMP11310 421 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 LCP1P13796 627 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 CD46P15529 392 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 STX17P56962 302 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 GCNT1Q02742 428 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 ARID5AQ03989 594 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 ZBTB16Q05516 673 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 CETN1Q12798 172 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 LRMPQ12912 555 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 GRIK2Q13002 908 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 STIM1Q13586 685 aa10.82□□□□□ -0.68
VPS4B-207ENST00000591519 TRIP6Q15654 476 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms