RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CXXC1Q9P0U4 656 aaPredicted RBP20.9■□□□□ 0.94
SMG8-203ENST00000578922 H3BRJ5 948 aa20.89■□□□□ 0.94
SMG8-203ENST00000578922 FGBP02675 491 aa20.89■□□□□ 0.94
SMG8-203ENST00000578922 ATF6P18850 670 aa20.89■□□□□ 0.94
SMG8-203ENST00000578922 GLUD2P49448 558 aa20.89■□□□□ 0.94
SMG8-203ENST00000578922 C7orf61Q8IZ16 206 aa20.89■□□□□ 0.94
SMG8-203ENST00000578922 CDC42EP4Q9H3Q1 356 aaKnown RBP20.89■□□□□ 0.94
SMG8-203ENST00000578922 ZNF487B1APH4 448 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 TCEA3O75764 348 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 SYN1P17600 705 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 SMARCB1Q12824 385 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 TAF10Q12962 218 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 RFX8Q6ZV50 586 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 SGSM3Q96HU1 749 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 PCDH9Q9HC56 1237 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 BACE2Q9Y5Z0 518 aa20.89■□□□□ 0.93
SMG8-203ENST00000578922 PTPRSQ13332 1948 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 IRAK2O43187 625 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 IGLV3-25P01717 112 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 RBL1P28749 1068 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 CA8P35219 290 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 FPGSQ05932 587 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 SCAPQ12770 1279 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 UBAP2Q5T6F2 1119 aaKnown RBP20.88■□□□□ 0.93
SMG8-203ENST00000578922 LRRC34Q8IZ02 419 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 BBOF1Q8ND07 529 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 PRMT1Q99873 361 aaKnown RBP20.88■□□□□ 0.93
SMG8-203ENST00000578922 ZBED2Q9BTP6 218 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 OXCT2Q9BYC2 517 aaPredicted RBP20.88■□□□□ 0.93
SMG8-203ENST00000578922 SIK2Q9H0K1 926 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 AAASQ9NRG9 546 aa20.88■□□□□ 0.93
SMG8-203ENST00000578922 KCNN4O15554 427 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 SEC24AO95486 1093 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 TBX18O95935 607 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 ZFXP17010 805 aaPredicted RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 RPL22P35268 128 aaKnown RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 PPIGQ13427 754 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMG8-203ENST00000578922 BEND5Q7L4P6 421 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 CCDC91Q7Z6B0 441 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 EXOC3L1Q86VI1 746 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 CCHCR1Q8TD31 782 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 MAGEC3Q8TD91 643 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 C2orf15Q8WU43 125 aaKnown RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 SMOC2Q9H3U7 446 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 DTLQ9NZJ0 730 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 RCOR3Q9P2K3 495 aaPredicted RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 NR2E3Q9Y5X4 410 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 MFSD11O43934 449 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 CSPG5O95196 566 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 TTC4O95801 387 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 MOCS2O96007 188 aaPredicted RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 SLCO1A2P46721 670 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 AIF1P55008 147 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 TPI1P60174 286 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 RPL10AP62906 217 aaKnown RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 DSG1Q02413 1049 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 RASIP1Q5U651 963 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 CYB5D1Q6P9G0 228 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 OR12D3Q9UGF7 316 aa20.87■□□□□ 0.93
SMG8-203ENST00000578922 COL4A4P53420 1690 aaPredicted RBP20.87■□□□□ 0.93
SMG8-203ENST00000578922 SLC38A8A6NNN8 435 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 DNALI1O14645 258 aaPredicted RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 RTN3O95197 1032 aaPredicted RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 EFEMP1Q12805 493 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 SPRED3Q2MJR0 410 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 CEP128Q6ZU80 1094 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 UHMK1Q8TAS1 419 aaKnown RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 SPATA17Q96L03 361 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 HERC2P3Q9BVR0 1158 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 IL37Q9NZH6 218 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 GJB5O95377 273 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 URODP06132 367 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 VIMP08670 466 aaKnown RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 SRGAP2BP0DMP2 458 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 DPYSQ14117 519 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 SYCP2LQ5T4T6 812 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 HIBCHQ6NVY1 386 aaPredicted RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 TP53INP2Q8IXH6 220 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 PARP9Q8IXQ6 854 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 CYP4F11Q9HBI6 524 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 USP29Q9HBJ7 922 aa20.86■□□□□ 0.93
SMG8-203ENST00000578922 XPO7Q9UIA9 1087 aaKnown RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 TPX2Q9ULW0 747 aaKnown RBP20.86■□□□□ 0.93
SMG8-203ENST00000578922 ALPK3Q96L96 1907 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 ERCC2P18074 760 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 SEMA3BQ13214 749 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 EIF4EBP2Q13542 120 aaPredicted RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 SNCBQ16143 134 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 DDX53Q86TM3 631 aaKnown RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 MIB1Q86YT6 1006 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 RELL1Q8IUW5 271 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 ARHGAP18Q8N392 663 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 ARHGEF2Q92974 986 aaKnown RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 TACO1Q9BSH4 297 aaKnown RBP20.85■□□□□ 0.93
SMG8-203ENST00000578922 FOXP3Q9BZS1 431 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 GOLGA8MH3BSY2 632 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 LRIG2O94898 1065 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 CCR1P32246 355 aa20.85■□□□□ 0.93
SMG8-203ENST00000578922 FIBCD1Q8N539 461 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms