RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SEPT10Q9P0V9 454 aa17.95■□□□□ 0.46
SCARF1-205ENST00000571272 ZNF195O14628 629 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ALDH1A2O94788 518 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 TGFB3P10600 412 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 GOT1P17174 413 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 EDNRBP24530 442 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ABCE1P61221 599 aaKnown RBP17.94■□□□□ 0.46
SCARF1-205ENST00000571272 OLIG2Q13516 323 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 C4orf22Q6V702 233 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ACMSDQ8TDX5 336 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ARNTL2Q8WYA1 636 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 VRTNQ9H8Y1 702 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 MTMR10Q9NXD2 777 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 TXNDC16Q9P2K2 825 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 KLHL33A6NCF5 533 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 STXBP5Q5T5C0 1151 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ARHGAP18Q8N392 663 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCARF1-205ENST00000571272 MOCOSQ96EN8 888 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 STN1Q9H668 368 aaKnown RBP17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ACSS2Q9NR19 701 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ZDHHC7Q9NXF8 308 aa17.94■□□□□ 0.46
SCARF1-205ENST00000571272 ZBTB14O43829 449 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 ABCG1P45844 678 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 RPS6KA3P51812 740 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 DPYSL2Q16555 572 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 STEAP4Q687X5 459 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 NCBP2-AS2Q69YL0 99 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 PPP1R36Q96LQ0 422 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 PDZD7Q9H5P4 517 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 DMAP1Q9NPF5 467 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-205ENST00000571272 DNAJC28Q9NX36 388 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SYBUQ9NX95 663 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SNX9Q9Y5X1 595 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 HCRTO43612 131 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 DESP17661 470 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 GRK2P25098 689 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 RBP5P82980 135 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SESTD1Q86VW0 696 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 PLD6Q8N2A8 252 aaKnown RBP17.93■□□□□ 0.46
SCARF1-205ENST00000571272 ZNF781Q8N8C0 355 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 GCNAQ96QF7 691 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SLC4A5Q9BY07 1137 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 VPS33BQ9H267 617 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 CXCL16Q9H2A7 254 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 COG4Q9H9E3 785 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 PRMT7Q9NVM4 692 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-205ENST00000571272 A0A0A0MRY4 1105 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 CPA3P15088 417 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 AMHR2Q16671 573 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 LBX2Q6XYB7 198 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 TMEM110Q86TL2 294 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 FBXW8Q8N3Y1 598 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SLC35F5Q8WV83 523 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SPATA13Q96N96 652 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 VCX3BQ9H321 246 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 ASB7Q9H672 318 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 RNF19AQ9NV58 838 aa17.93■□□□□ 0.46
SCARF1-205ENST00000571272 G3BP2Q9UN86 482 aaKnown RBP17.93■□□□□ 0.46
SCARF1-205ENST00000571272 MAGED2Q9UNF1 606 aaPredicted RBP17.93■□□□□ 0.46
SCARF1-205ENST00000571272 SF3B1O75533 1304 aaKnown RBP eCLIP17.92■□□□□ 0.462e-14■■■■■ 172.3
SCARF1-205ENST00000571272 CAPN8A6NHC0 703 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 PPEF2O14830 753 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 OR6B1O95007 311 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 COX4I1P13073 169 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 LCP1P13796 627 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
SCARF1-205ENST00000571272 BTKQ06187 659 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 PDK3Q15120 406 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 DBN1Q16643 649 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 SLC9B1Q4ZJI4 515 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 CELF3Q5SZQ8 465 aaKnown RBP17.92■□□□□ 0.46
SCARF1-205ENST00000571272 FBXL19Q6PCT2 694 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 SATL1Q86VE3 508 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 KLRG1Q96E93 195 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 NME7Q9Y5B8 376 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 GOLGA8QA0A0J9YX86 632 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 GOLGA8OA6NCC3 632 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 GOLGA8NF8WBI6 632 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 PGM3O95394 542 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 MCF2P10911 925 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 NR2C2P49116 596 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 SOWAHAQ2M3V2 549 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 PKDCCQ504Y2 493 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 NAPRTQ6XQN6 538 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 CYS1Q717R9 158 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 FAM131BQ86XD5 332 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 MAPK15Q8TD08 544 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 JADE3Q92613 823 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 KIF12Q96FN5 646 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 GGA3Q9NZ52 723 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 MORF4L1Q9UBU8 362 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 KIAA1257Q9ULG3 409 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 RPS6KL1Q9Y6S9 549 aa17.92■□□□□ 0.46
SCARF1-205ENST00000571272 HSPA4LO95757 839 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 VTNP04004 478 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 ZFXP17010 805 aaPredicted RBP17.91■□□□□ 0.46
SCARF1-205ENST00000571272 PGAM1P18669 254 aa17.91■□□□□ 0.46
SCARF1-205ENST00000571272 PSMB4P28070 264 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms