RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 IRF2BP1Q8IU81 584 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 TMTC1Q8IUR5 882 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 PCYOX1LQ8NBM8 494 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 IL17RDQ8NFM7 739 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RASSF8Q8NHQ8 419 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ASB12Q8WXK4 309 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 CALML4Q96GE6 196 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 CDHR1Q96JP9 859 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ZSWIM3Q96MP5 696 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 WDR11Q9BZH6 1224 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 CHST8Q9H2A9 424 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RAVER2Q9HCJ3 691 aaKnown RBP7.66□□□□□ -1.18
CNOT1-222ENST00000570139 KCNMB3Q9NPA1 279 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RNF146Q9NTX7 359 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 ANO10Q9NW15 660 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RGL1Q9NZL6 768 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 POLG2Q9UHN1 485 aa7.66□□□□□ -1.18
CNOT1-222ENST00000570139 RUVBL1Q9Y265 456 aaKnown RBP7.66□□□□□ -1.18
CNOT1-222ENST00000570139 GRM6O15303 877 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 POLR2DO15514 142 aaKnown RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 SOAT2O75908 522 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CELF2O95319 508 aaKnown RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 TDP2O95551 362 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CD4P01730 458 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 POLBP06746 335 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 FPR1P21462 350 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CNTFP26441 200 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 IL1R2P27930 398 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 STAT6P42226 847 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 ETV4P43268 484 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 KIR2DL3P43628 341 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 GCLCP48506 637 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 MEOX1P50221 254 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 SNAP25P60880 206 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CCNA1P78396 465 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 TLE2Q04725 743 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CEP55Q53EZ4 464 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 NT5DC1Q5TFE4 455 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 KRT79Q5XKE5 535 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 KLHL17Q6TDP4 642 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 MOGAT3Q86VF5 341 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 DTX1Q86Y01 620 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 LILRA3Q8N6C8 439 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 GLIS1Q8NBF1 620 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 PCSK9Q8NBP7 692 aaKnown RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 PLA2G15Q8NCC3 412 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 C1orf131Q8NDD1 294 aaKnown RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 SHCBP1Q8NEM2 672 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 DNERQ8NFT8 737 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 ETNPPLQ8TBG4 499 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 NEK9Q8TD19 979 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 STYXQ8WUJ0 223 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 GCDHQ92947 438 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CLMNQ96JQ2 1002 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 IWS1Q96ST2 819 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 BPIFA3Q9BQP9 254 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 FUCA2Q9BTY2 467 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 MROH8Q9H579 483 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 TTC12Q9H892 705 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 GRPEL1Q9HAV7 217 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 HEYLQ9NQ87 328 aaPredicted RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 MBNL3Q9NUK0 354 aaKnown RBP7.65□□□□□ -1.18
CNOT1-222ENST00000570139 RMND1Q9NWS8 449 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 LRWD1Q9UFC0 647 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 TUBE1Q9UJT0 475 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 CROTQ9UKG9 612 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 ADAMTS6Q9UKP5 1117 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 ZNF236Q9UL36 1845 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 PCDHA12Q9UN75 941 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 FZD1Q9UP38 647 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 PLEKHM1Q9Y4G2 1056 aa7.65□□□□□ -1.18
CNOT1-222ENST00000570139 A0A087WWL8 130 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PIP5K1BO14986 540 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 HOXC11O43248 304 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 SLC37A4O43826 429 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 RASSF9O75901 435 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PROCP04070 461 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 RNASE1P07998 156 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 GJB1P08034 283 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CKMT1AP12532 417 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 ALOX15P16050 662 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 GABRB3P28472 473 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CCND2P30279 289 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 HOXA13P31271 388 aaPredicted RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PPP1R2P41236 205 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 TXKP42681 527 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 ALDH1A3P47895 512 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 INHBEP58166 350 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 RPS6P62753 249 aaKnown RBP7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PRKG2Q13237 762 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 CAMK4Q16566 473 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 FAM110CQ1W6H9 321 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 PRAMEF14Q5SWL7 426 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 TREML2Q5T2D2 321 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 ARHGEF16Q5VV41 709 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 RRAGBQ5VZM2 374 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 TRIM68Q6AZZ1 485 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 LIN54Q6MZP7 749 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 DSTYKQ6XUX3 929 aa7.64□□□□□ -1.19
CNOT1-222ENST00000570139 B3GNT8Q7Z7M8 397 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms