RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 MSRB2Q9Y3D2 182 aa28.75■■■□□ 2.19
UBFD1-206ENST00000566669 SPAARA0A1B0GVQ0 90 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 C1QTNF9BB2RNN3 333 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 DNTTP04053 509 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 C1QTNF9P0C862 333 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 FAM133BQ5BKY9 247 aaKnown RBP28.74■■■□□ 2.19
UBFD1-206ENST00000566669 ZCCHC9Q8N567 271 aaKnown RBP28.74■■■□□ 2.19
UBFD1-206ENST00000566669 BTBD1Q9H0C5 482 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 CTNND2Q9UQB3 1225 aa28.74■■■□□ 2.19
UBFD1-206ENST00000566669 FAM221BA6H8Z2 402 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 GABBR2O75899 941 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 GPD2P43304 727 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 AFF3P51826 1226 aaKnown RBP28.73■■■□□ 2.19
UBFD1-206ENST00000566669 TRIP6Q15654 476 aaKnown RBP28.73■■■□□ 2.19
UBFD1-206ENST00000566669 PTPRNQ16849 979 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 NAXDQ8IW45 347 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 CYB5D2Q8WUJ1 264 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 GATA6Q92908 595 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 KAT5Q92993 513 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 TTC17Q96AE7 1141 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 FAM149B1Q96BN6 582 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 MED15Q96RN5 788 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 SGK2Q9HBY8 427 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 ST7Q9NRC1 585 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 CHD6Q8TD26 2715 aa28.73■■■□□ 2.19
UBFD1-206ENST00000566669 CAPN9O14815 690 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 RNASEH1O60930 286 aaKnown RBP28.72■■■□□ 2.19
UBFD1-206ENST00000566669 HLA-EP13747 358 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 MATKP42679 507 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 ARID5BQ14865 1188 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 TEAD4Q15561 434 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 ZNF776Q68DI1 518 aaPredicted RBP28.72■■■□□ 2.19
UBFD1-206ENST00000566669 RFWD3Q6PCD5 774 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 DQX1Q8TE96 717 aaKnown RBP28.72■■■□□ 2.19
UBFD1-206ENST00000566669 TMEM121BQ9BXQ6 578 aaPredicted RBP28.72■■■□□ 2.19
UBFD1-206ENST00000566669 MIS12Q9H081 205 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 INTS2Q9H0H0 1204 aaKnown RBP28.72■■■□□ 2.19
UBFD1-206ENST00000566669 PRSS16Q9NQE7 514 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 NCKAP1Q9Y2A7 1128 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 PCDHGB2Q9Y5G2 931 aa28.72■■■□□ 2.19
UBFD1-206ENST00000566669 MOCS3O95396 460 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 APOEP02649 317 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 KRT5P13647 590 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 BMP6P22004 513 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 MTA1Q13330 715 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 CDH18Q13634 790 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 USP30Q70CQ3 517 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 ARHGEF19Q8IW93 802 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 SCUBE3Q8IX30 993 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 SLC39A13Q96H72 371 aa28.71■■■□□ 2.19
UBFD1-206ENST00000566669 FCRL2Q96LA5 508 aaPredicted RBP28.71■■■□□ 2.19
UBFD1-206ENST00000566669 SRRTQ9BXP5 876 aaKnown RBP28.71■■■□□ 2.19
UBFD1-206ENST00000566669 EIF2B4Q9UI10 523 aaKnown RBP28.71■■■□□ 2.19
UBFD1-206ENST00000566669 PIK3R2O00459 728 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 HYAL3O43820 417 aaPredicted RBP28.7■■■□□ 2.18
UBFD1-206ENST00000566669 SH3BP5O60239 455 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 SPINK2P20155 84 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 SLC6A4P31645 630 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 GLRX5Q86SX6 157 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 OR2I1PQ8NGU4 316 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 C1orf216Q8TAB5 229 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 CLEC4CQ8WTT0 213 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 KREMEN1Q96MU8 473 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 SLC4A5Q9BY07 1137 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 POPDC2Q9HBU9 364 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 ZMIZ1Q9ULJ6 1067 aa28.7■■■□□ 2.18
UBFD1-206ENST00000566669 APOBEC2Q9Y235 224 aaKnown RBP28.7■■■□□ 2.18
UBFD1-206ENST00000566669 ZBTB32Q9Y2Y4 487 aaPredicted RBP28.7■■■□□ 2.18
UBFD1-206ENST00000566669 SEMA4FO95754 770 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 FYNP06241 537 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 SRPRAP08240 638 aaKnown RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 CD70P32970 193 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 SGSHP51688 502 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 RPS14P62263 151 aaKnown RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 SUZ12Q15022 739 aaKnown RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 MS4A13Q5J8X5 152 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 TMEM110Q86TL2 294 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 FAM124AQ86V42 546 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 RSPH9Q9H1X1 276 aaPredicted RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 THAP9Q9H5L6 903 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 GAREM1Q9H706 876 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 UBE2TQ9NPD8 197 aaPredicted RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 SLC12A6Q9UHW9 1150 aa28.69■■■□□ 2.18
UBFD1-206ENST00000566669 TPX2Q9ULW0 747 aaKnown RBP28.69■■■□□ 2.18
UBFD1-206ENST00000566669 SLC2A3P11169 496 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 YWHAZP63104 245 aaKnown RBP28.68■■■□□ 2.18
UBFD1-206ENST00000566669 HNRNPA1L2Q32P51 320 aaKnown RBP28.68■■■□□ 2.18
UBFD1-206ENST00000566669 RAB44Q7Z6P3 723 aaPredicted RBP28.68■■■□□ 2.18
UBFD1-206ENST00000566669 CACUL1Q86Y37 369 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 LMLNQ96KR4 655 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 BTN2A3PQ96KV6 586 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 KIAA1522Q9P206 1035 aaPredicted RBP28.68■■■□□ 2.18
UBFD1-206ENST00000566669 STIM2Q9P246 746 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 TJP2Q9UDY2 1190 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 ADAMTS9Q9P2N4 1935 aa28.68■■■□□ 2.18
UBFD1-206ENST00000566669 CFAP47Q6ZTR5 3102 aa28.67■■■□□ 2.18
UBFD1-206ENST00000566669 GOLGA6L7A0A1B0GV03 622 aa28.67■■■□□ 2.18
UBFD1-206ENST00000566669 TARSL2A2RTX5 802 aaKnown RBP28.67■■■□□ 2.18
UBFD1-206ENST00000566669 BIN1O00499 593 aa28.67■■■□□ 2.18
UBFD1-206ENST00000566669 FLRT2O43155 660 aa28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms